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View Structure Prediction Details

Protein: gi|15217972, gi|...
Organism: Arabidopsis thaliana
Length: 164 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15217972, gi|....

Description E-value Query
Range
Subject
Range
gi|72397563, gi|... - gi|73670401|ref|YP_306416.1| hypothetical protein Mbar_A2941 [Methanosarcina barkeri str. Fusaro], g...
160.0 [0..2] [162..385]

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Predicted Domain #1
Region A:
Residues: [1-164]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNNGEKIEAA NRKKEEGNLL YKTQKYERAA KKYNKAAECI ENGKFEGGDE KQVKALRVSC  60
   61 FLNGAACSLK LKNFLETIVL CSEVLDIEFQ NVKALYRRAQ SYIEVGDLIS AEMDINRALE 120
  121 ADPENREVKS LYKAMKLSKA ESDRRDAKLY ANMFALSKVR THFP

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 27.30103
Match: 1ihgA
Description: Cyclophilin 40; Cyclophilin 40 isomerase domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.02652482814057 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle