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View Structure Prediction Details

Protein: gi|15215861, gi|...
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15215861, gi|....

Description E-value Query
Range
Subject
Range
gi|21593011 - gi|21593011|gb|AAM64960.1| unknown [Arabidopsis thaliana]
587.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK  60
   61 YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS PSKEKSSGFL SFSRVMSLDS 120
  121 MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA 180
  181 T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGSDVMFREL RRPRGDPEVQ AAKDREQYFK LKNKIQVLTL GIGGVGLVSA YISYTPEIAL  60
   61 SFGAGLLGSL AYMRMLGNSV DAMADGARGV AKGAANQPRL LVPVVLVMIF NRWNAILVPE 120
  121 YGFMHLELIP MLVGFFTYKI ATFFQAIEEA ISITTQKPES ISPDTQASD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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