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View Structure Prediction Details

Protein: gi|15215861, gi|...
Organism: Arabidopsis thaliana
Length: 350 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15215861, gi|....

Description E-value Query
Range
Subject
Range
gi|21593011 - gi|21593011|gb|AAM64960.1| unknown [Arabidopsis thaliana]
587.0 [0..1] [350..1]

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Predicted Domain #1
Region A:
Residues: [1-181]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILSYISAT STTPPIPQDQ SPNSRLPTKI ILPNKKPEKW STGVAPGEYG GPPTTTKLRK  60
   61 YWGGEKEDPI TSTDLIWNRD FMDQMKKLFD DPNDSSLDPS PSKEKSSGFL SFSRVMSLDS 120
  121 MDVDLSKELA SSSKSVVKNR LDTSKSEAKK QMSKAIVSPK WKLAPTRREQ EKWDRATKAA 180
  181 T

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [182-350]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GGSDVMFREL RRPRGDPEVQ AAKDREQYFK LKNKIQVLTL GIGGVGLVSA YISYTPEIAL  60
   61 SFGAGLLGSL AYMRMLGNSV DAMADGARGV AKGAANQPRL LVPVVLVMIF NRWNAILVPE 120
  121 YGFMHLELIP MLVGFFTYKI ATFFQAIEEA ISITTQKPES ISPDTQASD

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


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