YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ACCO3_ARATH
Organism: Arabidopsis thaliana
Length: 320 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCO3_ARATH.

Description E-value Query
Range
Subject
Range
gi|73761685 - gi|73761685|gb|AAZ83342.1| ACC oxidase 1 [Gossypium hirsutum]
396.0 [0..3] [317..1]

Back

Predicted Domain #1
Region A:
Residues: [1-320]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEMNIKFPVI DLSKLNGEER DQTMALIDDA CQNWGFFELV NHGLPYDLMD NIERMTKEHY  60
   61 KKHMEQKFKE MLRSKGLDTL ETEVEDVDWE STFYLHHLPQ SNLYDIPDMS NEYRLAMKDF 120
  121 GKRLEILAEE LLDLLCENLG LEKGYLKKVF HGTTGPTFAT KLSNYPPCPK PEMIKGLRAH 180
  181 TDAGGLILLF QDDKVSGLQL LKDGDWVDVP PLKHSIVINL GDQLEVITNG KYKSVMHRVM 240
  241 TQKEGNRMSI ASFYNPGSDA EISPATSLVD KDSKYPSFVF DDYMKLYAGL KFQAKEPRFE 300
  301 AMKNAEAAAD LNPVAVVETF 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 106.0
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
1-aminocyclopropane-1-carboxylate oxidase activity 2.55319769490634 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 1.82471557626796 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 1.45256699472411 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.881222146308311 bayes_pls_golite062009
oxidoreductase activity 0.748070809709687 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle