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View Structure Prediction Details

Protein: gi|7488090, gi|1...
Organism: Arabidopsis thaliana
Length: 203 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|7488090, gi|1....

Description E-value Query
Range
Subject
Range
gi|42568255, gi|... - gi|8843884|dbj|BAA97410.1| disease resistance protein-like [Arabidopsis thaliana], gi|42570590|ref|N...
275.0 [0..1] [203..7]

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Predicted Domain #1
Region A:
Residues: [1-131]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTFFSPTQVF LNYRGEQLRR SFVSHLIDAF ERNEINFFVD KYEQRGKDLK NLFLRIQESK  60
   61 IALAIFSTRY TESSWCMDEL VKIKKLADKR KLHVIPIFYK VKVEDVRKQT GEFGDNFWTL 120
  121 AKVSSGDQIK K

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.39794
Match: 1fyvA
Description: Toll-like receptor 1, TLR1
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.261666574457319 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [132-203]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 WKEALECIPN KMGLSLGDKS DEADFIKEVV KAVQCVVATI GLEEEENHFG KKKRKDCKCE  60
   61 LPDLKKSRTK KL

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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