| Protein: | CRF1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 287 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRF1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
197.0 | [0..39] | [261..3] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 METEKKVSLP RILRISVTDP YATDSSSDEE EEVDFDALST KRRRVKKYVK EVVLDSVVSD 60
61 KEKPMKKKRK KRVVTVPVVV
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.411 | d.58.36 | Sulfite reductase, domains 1 and 3 |
| View | Download | 0.405 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.385 | g.14.1 | Kringle-like |
| View | Download | 0.349 | a.28.1 | ACP-like |
| View | Download | 0.309 | d.58.3 | Protease propeptides/inhibitors |
|
Region A: Residues: [81-154] |
1 11 21 31 41 51
| | | | | |
1 TTATRKFRGV RQRPWGKWAA EIRDPSRRVR VWLGTFDTAE EAAIVYDNAA IQLRGPNAEL 60
61 NFPPPPVTEN VEEA
|
| Detection Method: | |
| Confidence: | 25.39794 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.339357445627225 | bayes_pls_golite062009 |
|
Region A: Residues: [155-287] |
1 11 21 31 41 51
| | | | | |
1 STEVKGVSDF IIGGGECLRS PVSVLESPFS GESTAVKEEF VGVSTAEIVV KKEPSFNGSD 60
61 FSAPLFSDDD VFGFSTSMSE SFGGDLFGDN LFADMSFGSG FGFGSGSGFS SWHVEDHFQD 120
121 IGDLFGSDPV LTV
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.262 | a.118.1 | ARM repeat |
