| Protein: | DSK2A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 538 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for DSK2A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
257.0 | [0..2] | [536..12] |
|
Region A: Residues: [1-95] |
1 11 21 31 41 51
| | | | | |
1 MGGEADSRQP LTAEGVAVAV NVRCSNGTKF SVTTSLDSTV ESFKELIAQN SDVPANQQRL 60
61 IYKGRILKDD QTLLSYGLQA DHTVHMVRGF VPSSP
|
| Detection Method: |  |
| Confidence: | 22.30103 |
| Match: | 1yx5B |
| Description: | Solution Structure of S5a UIM-1/Ubiquitin Complex |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.793170221927894 | bayes_pls_golite062009 |
| protein binding | 0.756373756021813 | bayes_pls_golite062009 |
|
Region A: Residues: [96-282] |
1 11 21 31 41 51
| | | | | |
1 SAPAANAGNQ TTAPQAVGSN DSSNLGGGES LFPGLGFNPL GGGNAMAGLF GSGLPDLEQA 60
61 QQQLAQNPNM IREMMNTPAI QNLMNNPEFM RSMIMNNPQM RELVDRNPEL GHVLNDPSIL 120
121 RQTLEAARNP ELMREMMRNT DRAMSNIESM PEGFNMLRRM YENVQEPLMN ATTMSENAGN 180
181 NTSSNPF
|
| Detection Method: | |
| Confidence: | 1.05 |
| Match: | 1oqyA |
| Description: | Structure of the DNA repair protein hHR23a |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.432660225684123 | bayes_pls_golite062009 |
|
Region A: Residues: [283-467] |
1 11 21 31 41 51
| | | | | |
1 AALLGNQGVT TQGSDTSNNI SAPNAETGTP NANPLPNPWG ATAGQTTAPG RTNAGLGGLG 60
61 GLGGLGGLGM LGADSPLGAT PDASQLSQIL QNPAMSQMMQ SVLSNPQYMN QLMSLNPQLR 120
121 SMLDMNPQLR EMMQNPDFLR QFSSPEMMQQ MMSLQQSLFS QNRNTAGQDP TQTGAATGTA 180
181 NNGGL
|
| Detection Method: | |
| Confidence: | 6.09691 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [468-538] |
1 11 21 31 41 51
| | | | | |
1 DLLMNMFGSL GAGGLSGTNQ PNVPPEERFA TQLQQLQEMG FYDRAENIRA LLATNGNVNA 60
61 AVERLLGSIG Q
|
| Detection Method: | |
| Confidence: | 9.0 |
| Match: | 1vejA |
| Description: | Solution Structure of RSGI RUH-016, a UBA Domain from mouse cDNA |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.410473383777825 | bayes_pls_golite062009 |
