| Protein: | PUB9_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 460 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUB9_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
204.0 | [0..13] | [455..2] |
|
Region A: Residues: [1-460] |
1 11 21 31 41 51
| | | | | |
1 MAKTGVFDSD PTAIAKAKEL KREMKKLLIK IDDEDDLGVQ TIDQLQDALS ALREATMRKM 60
61 AKSSSLEMLE TVSCPEEFRC PLSNELMRDP VVLASGQTYD KLFIQKWLSS GNRTCPKTQQ 120
121 VLPHTALTPN LLIREMISKW CKKNGLETKS QYHPNLVNED ETVTRSDREI FNSLLCKVSS 180
181 SNLQDQKSAA KELRLLTRKG TEFRALFGES PDEITRLVNP LLHGSNPDEK LQEDVVTTLL 240
241 NISIHDDSNK KLVCENPNVI PLLIDALRRG TVATRSNAAA AIFTLSALDS NKVLIGKSGI 300
301 LKPLIDLLEE GNPLAIKDVA AAIFTLCIAH ENRSRAVRDG AVRVLGKKIS NGLYVDELLA 360
361 ILAMLVTHWK AVEELGELGG VSWLLKITRE SECKRNKENA IVILHTICFS DRTKWKEIKE 420
421 EENAHGTITK LSREGTSRAQ RKANGILDRL RKAMNLTHTA
|
| Detection Method: |  |
| Confidence: | 43.30103 |
| Match: | 1wa5B |
| Description: | Crystal structure of the exportin Cse1p complexed with its cargo ( Kap60p) and RanGTP |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.373576425899935 | bayes_pls_golite062009 |
