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View Structure Prediction Details

Protein: gi|15222747, gi|...
Organism: Arabidopsis thaliana
Length: 555 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|15222747, gi|....

Description E-value Query
Range
Subject
Range
gi|20465921, gi|... - gi|9280290|dbj|BAB01745.1| BNH protein; pectinesterase-like protein; pollen-secific protein-like [Ar...
393.0 [0..7] [553..5]

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Predicted Domain #1
Region A:
Residues: [1-555]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGGVKLLAV CLCVATATVM MVQAEDPYFH HVWNVTYGTA SPLGVPQQVI LINGQFPGPN  60
   61 INSTSNNNVI VNVFNNLDEP FLITWAGIQH RKNCWQDGTA GTMCPIPPGQ NFTYHFQPKD 120
  121 QIGSYFYYPT TAMHRAAGGF GGLRVNSRLL IPVPYADPED DYTILINDWY TKSHTQLKKF 180
  181 LDSGRTIGRP DGILINGKSG KTDGSDKPLF TLKPGKTYRV RICNVGLKAS LNFRIQNHKM 240
  241 KLVEMEGSHV LQNDYDSLDV HVGQCFGVIV TADQEPKDYY MIASTRFLKK PLTTTGLLRY 300
  301 EGGKGPASSQ LPAAPVGWAW SLNQYRSFRW NLTASAARPN PQGSYHYGKI NITRTIKLVN 360
  361 TQGKVDGKLR YALSGVSHTD PETPLKLAEY FGVADKVFKY DTISDNPNPD QIKNIKIEPN 420
  421 VLNITHRTFI EVVFENHERS VQSWHLDGYS FFAVAVEPGT WTPEKRKNYN LLDAVSRHTV 480
  481 QVYPKCWAAI LLTFDNCGMW NIRSENAERR YLGQQLYASV LSPEKSLRDE YNMPETSLQC 540
  541 GLVKGKPKVN PYAGA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 92.522879
Match: 1aozA
Description: Ascorbate oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
cation transmembrane transporter activity 3.01218347550477 bayes_pls_golite062009
ion transmembrane transporter activity 2.94535655802043 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 2.6745480751389 bayes_pls_golite062009
inorganic cation transmembrane transporter activity 2.65536020269373 bayes_pls_golite062009
transition metal ion transmembrane transporter activity 2.17429358667283 bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity 1.63942316748862 bayes_pls_golite062009
iron ion transmembrane transporter activity 1.51790376716885 bayes_pls_golite062009
hydrogen ion transmembrane transporter activity 1.46068051535503 bayes_pls_golite062009
transporter activity 1.20799429432885 bayes_pls_golite062009
metal ion transmembrane transporter activity 1.14867039407339 bayes_pls_golite062009
transmembrane transporter activity 1.09624639459552 bayes_pls_golite062009
substrate-specific transporter activity 0.85648428256869 bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity 0.761084719356529 bayes_pls_golite062009
copper ion binding 0.73440414441333 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions, oxygen as acceptor 0.575651787344859 bayes_pls_golite062009
ferroxidase activity 0.575651787344859 bayes_pls_golite062009
oxidoreductase activity, oxidizing metal ions 0.17115124627182 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle