| Protein: | TF2H2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 421 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TF2H2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
347.0 | [0..17] | [415..2] |
|
Region A: Residues: [1-282] |
1 11 21 31 41 51
| | | | | |
1 MSNQRKRSND EREEEDDEDA EGIGEWERAY VDDRSWEELQ EDESGLLRPI DNSAIYHAQY 60
61 RRRLRMLSAA AAGTRIQKGL IRYLYIVIDF SRAAAEMDFR PSRMAIMAKH VEAFIREFFD 120
121 QNPLSQIGLV SIKNGVAHTL TDLGGSPETH IKALMGKLEA LGDSSLQNAL ELVHEHLNQV 180
181 PSYGHREVLI LYSALCTCDP GDIMETIQKC KKSKLRCSVI GLSAEMFICK HLCQETGGLY 240
241 SVAVDEVHLK DLLLEHAPPP PAIAEFAIAN LIKMGFPQRA AE
|
| Detection Method: |  |
| Confidence: | 14.522879 |
| Match: | 2ok5A |
| Description: | No description for 2ok5A was found. |
| Term | Confidence | Notes |
| binding | 2.78081530457495 | bayes_pls_golite062009 |
| protein binding | 1.87564165872234 | bayes_pls_golite062009 |
| DNA binding | 1.67175195853604 | bayes_pls_golite062009 |
| nucleic acid binding | 1.66804415166051 | bayes_pls_golite062009 |
| cell surface binding | 1.100737691234 | bayes_pls_golite062009 |
| eukaryotic cell surface binding | 0.75976840299626 | bayes_pls_golite062009 |
| hydrolase activity | 0.713727944323346 | bayes_pls_golite062009 |
| protein complex binding | 0.68878168136573 | bayes_pls_golite062009 |
| receptor activity | 0.537407856490475 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.450760554291027 | bayes_pls_golite062009 |
| transmembrane receptor activity | 0.414030020499752 | bayes_pls_golite062009 |
| protein heterodimerization activity | 0.32921284315242 | bayes_pls_golite062009 |
| catalytic activity | 0.252597265474331 | bayes_pls_golite062009 |
| heparin binding | 0.0497639742848703 | bayes_pls_golite062009 |
| complement binding | 0.0415669963240149 | bayes_pls_golite062009 |
|
Region A: Residues: [283-421] |
1 11 21 31 41 51
| | | | | |
1 GSMAICSCHK EVKIGAGYMC PRCKARVCDL PTECTICGLT LVSSPHLARS YHHLFPIAPF 60
61 DEVPALSSLN DNRRKLGKSC FGCQQSLIGA GNKPVPCVTC RKCKHYFCLD CDIYIHESLH 120
121 NCPGCESIHR PKSVSLMEE
|
| Detection Method: | |
| Confidence: | 16.09691 |
| Match: | 1z60A |
| Description: | Solution structure of the carboxy-terminal domain of human TFIIH P44 subunit |
Matching Structure (courtesy of the PDB): |
|
