| Protein: | ORP1B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 489 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ORP1B_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
554.0 | [0..35] | [489..300] |
|
Region A: Residues: [1-80] |
1 11 21 31 41 51
| | | | | |
1 MEARVISCTT FGDNKVVKIA VLNHQAITKY KAGENETTVV VSDDTCPEKD VKEIKKFCEK 60
61 LGYVYEGRLS EEYTQTNTGP
|
| Detection Method: |  |
Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.
| MCM Score |
GO Score |
GO Term |
SCOP Match |
SCOP Description | ||
| View | Download | 0.747 | N/A | N/A | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.721 | N/A | N/A | b.71.1 | Glycosyl hydrolase domain |
| View | Download | 0.715 | N/A | N/A | d.79.3 | L30e-like |
| View | Download | 0.683 | N/A | N/A | d.79.3 | L30e-like |
| View | Download | 0.672 | N/A | N/A | d.58.18 | Regulatory domain in the aminoacid metabolism |
|
Region A: Residues: [81-489] |
1 11 21 31 41 51
| | | | | |
1 DDDWITNGFE SDDDVDPSIK TIGFNYPHVN RRNKLPDPVE KEKSVSLWSM IKDNIGKDLT 60
61 KVCLPVYFNE PLSSLQKCFE DLEYSYLLDQ ASEWGKRGNN LMRILNVAAF AVSGYASTKG 120
121 RICKPFNPML GETYEADYPD KGLRFFSEKV SHHPMIVACH CDGTGWKFWG DSNLKSKFWG 180
181 RSIQLDPIGL LTLQFDDGEI VQWSKVTTSI YNLILGKLYC DHYGTMLIEG NGEYSCKLKF 240
241 KKQSMMDRNP HQVQGIVEDK NGKTVAKLFG KWDESMYYVM VNQGKESESH LLWKRNKPLE 300
301 NPTKYNLTRF GITLNELTPD LKEMLPPTDS RLRPDQRYLE KGEFEMGNRE KLRLEQRQRQ 360
361 AREKQERGWK PTWFSKEKGS ETYRYIGGYW EARDSGRWDD CPDIFGQVH
|
| Detection Method: | |
| Confidence: | 70.69897 |
| Match: | 1zhtA |
| Description: | Structure of yeast oxysterol binding protein Osh4 in complex with 7-hydroxycholesterol |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| sterol binding | 3.12877992228795 | bayes_pls_golite062009 |
| steroid binding | 2.54679035876403 | bayes_pls_golite062009 |
| binding | 1.67154210149282 | bayes_pls_golite062009 |
| lipid binding | 1.46539100663772 | bayes_pls_golite062009 |
| oxysterol binding | 1.1738554488982 | bayes_pls_golite062009 |
| phospholipid binding | 0.0867097353003303 | bayes_pls_golite062009 |
