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View Structure Prediction Details

Protein: BOR2_ARATH
Organism: Arabidopsis thaliana
Length: 703 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOR2_ARATH.

Description E-value Query
Range
Subject
Range
BOR1_ARATH - Boron transporter 1 OS=Arabidopsis thaliana GN=BOR1 PE=1 SV=1
490.0 [0..1] [702..1]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER  60
   61 STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV IMYTFMFNFA KGRPELGRNL 120
  121 FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR 180
  181 APAREDLKLV EFLPSWRFAN GMFALVLSFG LLITALRS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [219-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKARSWRYGT GWLRSLVADY GVPLMVLVWT GVSYIPTGDV PKGIPRRLFS PNPWSPGAYE  60
   61 NWTVVKEM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [287-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQVPIVYIIG AFIPATMIAV LYYFDHSVAS QLAQQKEFNL RKPSSYHYDL LLLGFLTLMC  60
   61 GLLGIPPSNG VIPQSPMHTK SLATLKYQLL RNRLVATARK SIKQNASLGQ LYGNMQDVYN 120
  121 QMQTPLVYQQ PQGLKELRES TIQATTFTGN LDAPVDETLF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [447-613]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIEKEIDDLL PIEVKEQRVS NLLQAVMVGG CVAAMPLLKM IPTSVLWGYF AFMAIESLPG  60
   61 NQFWERILLL FTAPSRRFKV LEDNHATFVE TVPFKTIAMF TIFQTTYLLT CFGLTWIPIA 120
  121 GVMFPLLIMF LIPVRQYILP RFFKSAHLQD LDAAEYEEAP ALPFHLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [614-703]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPEAEMGSTA SYPCDSEILD EFITRSRGEF RHTCSPKVTS STSTPVYNRN LSQVFSPRVI  60
   61 DLRGEMSPRL SGKGQNSPKP SPLNPSSSSK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.96
Match: 1qd7B
Description: 30S subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle