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View Structure Prediction Details

Protein: BOR2_ARATH
Organism: Arabidopsis thaliana
Length: 703 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for BOR2_ARATH.

Description E-value Query
Range
Subject
Range
BOR1_ARATH - Boron transporter 1 OS=Arabidopsis thaliana GN=BOR1 PE=1 SV=1
490.0 [0..1] [702..1]

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Predicted Domain #1
Region A:
Residues: [1-218]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEETFVPFEG IKNDLKGRLM CYKQDWTGGI KAGFRILAPT TYIFFASAIP VISFGEQLER  60
   61 STDGVLTAVQ TLASTAICGI IHSIIGGQPL LILGVAEPTV IMYTFMFNFA KGRPELGRNL 120
  121 FLAWSGWVCV WTSLILFVLA ICGACSFINR FTRVAGELFG LLIAMLFMQQ AIKGLVDEFR 180
  181 APAREDLKLV EFLPSWRFAN GMFALVLSFG LLITALRS

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [219-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 RKARSWRYGT GWLRSLVADY GVPLMVLVWT GVSYIPTGDV PKGIPRRLFS PNPWSPGAYE  60
   61 NWTVVKEM

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #3
Region A:
Residues: [287-446]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 LQVPIVYIIG AFIPATMIAV LYYFDHSVAS QLAQQKEFNL RKPSSYHYDL LLLGFLTLMC  60
   61 GLLGIPPSNG VIPQSPMHTK SLATLKYQLL RNRLVATARK SIKQNASLGQ LYGNMQDVYN 120
  121 QMQTPLVYQQ PQGLKELRES TIQATTFTGN LDAPVDETLF 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #4
Region A:
Residues: [447-613]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DIEKEIDDLL PIEVKEQRVS NLLQAVMVGG CVAAMPLLKM IPTSVLWGYF AFMAIESLPG  60
   61 NQFWERILLL FTAPSRRFKV LEDNHATFVE TVPFKTIAMF TIFQTTYLLT CFGLTWIPIA 120
  121 GVMFPLLIMF LIPVRQYILP RFFKSAHLQD LDAAEYEEAP ALPFHLA

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #5
Region A:
Residues: [614-703]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VPEAEMGSTA SYPCDSEILD EFITRSRGEF RHTCSPKVTS STSTPVYNRN LSQVFSPRVI  60
   61 DLRGEMSPRL SGKGQNSPKP SPLNPSSSSK 

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 0.96
Match: 1qd7B
Description: 30S subunit
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle