| Protein: | SMC6B_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1057 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
No multiple sequence alignment data found for SMC6B_ARATH.
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Region A: Residues: [1-84] |
1 11 21 31 41 51
| | | | | |
1 MVKSGARASD SFIKQRSGSG SILRIKVENF MCHSNLQIEF GEWVNFITGQ NGSGKSAILT 60
61 ALCVAFGCRA RGTQRAATLK DFIK
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| Detection Method: |  |
| Confidence: | 13.154902 |
| Match: | 1us8A |
| Description: | The Rad50 signature motif: essential to ATP binding and biological function |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [85-403] |
1 11 21 31 41 51
| | | | | |
1 TGCSYAVVQV EMKNSGEDAF KPEIYGGVII IERRITESAT ATVLKDYLGK KVSNKRDELR 60
61 ELVEHFNIDV ENPCVVMSQD KSREFLHSGN DKDKFKFFFK ATLLQQVNDL LQSIYEHLTK 120
121 ATAIVDELEN TIKPIEKEIS ELRGKIKNME QVEEIAQRLQ QLKKKLAWSW VYDVDRQLQE 180
181 QTEKIVKLKE RIPTCQAKID WELGKVESLR DTLTKKKAQV ACLMDESTAM KREIESFHQS 240
241 AKTAVREKIA LQEEFNHKCN YVQKIKDRVR RLERQVGDIN EQTMKNTQAE QSEIEEKLKY 300
301 LEQEVEKVET LRSRLKEEE
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| Detection Method: | |
| Confidence: | 15.522879 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [404-619] |
1 11 21 31 41 51
| | | | | |
1 NCFLEKAFEG RKKMEHIEDM IKNHQKRQRF ITSNINDLKK HQTNKVTAFG GDRVINLLQA 60
61 IERNHRRFRK PPIGPIGSHV TLVNGNKWAS SVEQALGTLL NAFIVTDHKD SLTLRGCANE 120
121 ANYRNLKIII YDFSRPRLNI PRHMVPQTEH PTIFSVIDSD NPTVLNVLVD QSGVERQVLA 180
181 ENYEEGKAVA FGKRLSNLKE VYTLDGYKMF FRGPVQ
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| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
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Region A: Residues: [620-913] |
1 11 21 31 41 51
| | | | | |
1 TTLPPLSRRP SRLCASFDDQ IKDLEIEASK EQNEINQCMR RKREAEENLE ELELKVRQLK 60
61 KHRSQAEKVL TTKELEMHDL KNTVAAEIEA LPSSSVNELQ REIMKDLEEI DEKEAFLEKL 120
121 QNCLKEAELK ANKLTALFEN MRESAKGEID AFEEAENELK KIEKDLQSAE AEKIHYENIM 180
181 KNKVLPDIKN AEANYEELKN KRKESDQKAS EICPESEIES LGPWDGSTPE QLSAQITRMN 240
241 QRLHRENQQF SESIDDLRMM YESLERKIAK KRKSYQDHRE KLMACKNALD SRWA
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| Detection Method: | |
| Confidence: | 9.522879 |
| Match: | 2tmaA |
| Description: | Tropomyosin |
Matching Structure (courtesy of the PDB): |
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Region A: Residues: [914-1057] |
1 11 21 31 41 51
| | | | | |
1 KFQRNASLLR RQLTWQFNAH LGKKGISGHI KVSYENKTLS IEVKMPQDAT SNVVRDTKGL 60
61 SGGERSFSTL CFALALHEMT EAPFRAMDEF DVFMDAVSRK ISLDALVDFA IGEGSQWMFI 120
121 TPHDISMVKS HERIKKQQMA APRS
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| Detection Method: | |
| Confidence: | 17.154902 |
| Match: | 1xewY |
| Description: | Structural biochemistry of ATP-driven dimerization and DNA stimulated activation of SMC ATPases. |
Matching Structure (courtesy of the PDB): |
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