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View Structure Prediction Details

Protein: gi|9758683, gi|1...
Organism: Arabidopsis thaliana
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758683, gi|1....

Description E-value Query
Range
Subject
Range
gi|92870579 - gi|92870579|gb|ABE79863.1| Protein of unknown function DUF860, plant [Medicago truncatula]
503.0 [0..1] [421..1]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLKSLRYS SIREALTHQN PTKSSFLCPL YFYNQRRWLK PVDSAQTRLE NRTRDHQLDK  60
   61 IIPQIRKLNI ILEISKLMSS KKRGPFVSLQ LMSRWKNLVG LNVNVGAFIG KYPHAFEIFT 120
  121 HPFSKNLCCK ITEKFKVLID EEENVVRECE VDAVKRVKKL LLLSKHGVLR VHALRLIRKE 180
  181 LGLPEDFRDS ILAKYSSEFR LVDLETLELV DRDDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLCVAKVEEW REVEYREKWL SKFETNYAFP IHLPTGFKIE KGFREELKNW QRVPYVKPYD  60
   61 RKEISRGLER FEKRVVAVIH ELLSLTVEKM VEVERLAHFR KDLGIEVNVR EVILKHPGIF 120
  121 YVSTKGSSQT LFLREAYSKG CLIEPNPIYN VRRKMLDLVL LKTRYSRMLL QREDETHREE 180
  181 KSRDVLISSN EDWEGGRDGD WVLPILGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle