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View Structure Prediction Details

Protein: gi|9758683, gi|1...
Organism: Arabidopsis thaliana
Length: 423 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|9758683, gi|1....

Description E-value Query
Range
Subject
Range
gi|92870579 - gi|92870579|gb|ABE79863.1| Protein of unknown function DUF860, plant [Medicago truncatula]
503.0 [0..1] [421..1]

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Predicted Domain #1
Region A:
Residues: [1-215]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLKSLRYS SIREALTHQN PTKSSFLCPL YFYNQRRWLK PVDSAQTRLE NRTRDHQLDK  60
   61 IIPQIRKLNI ILEISKLMSS KKRGPFVSLQ LMSRWKNLVG LNVNVGAFIG KYPHAFEIFT 120
  121 HPFSKNLCCK ITEKFKVLID EEENVVRECE VDAVKRVKKL LLLSKHGVLR VHALRLIRKE 180
  181 LGLPEDFRDS ILAKYSSEFR LVDLETLELV DRDDE

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [216-423]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SLCVAKVEEW REVEYREKWL SKFETNYAFP IHLPTGFKIE KGFREELKNW QRVPYVKPYD  60
   61 RKEISRGLER FEKRVVAVIH ELLSLTVEKM VEVERLAHFR KDLGIEVNVR EVILKHPGIF 120
  121 YVSTKGSSQT LFLREAYSKG CLIEPNPIYN VRRKMLDLVL LKTRYSRMLL QREDETHREE 180
  181 KSRDVLISSN EDWEGGRDGD WVLPILGK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below are all of our structure predictions for this domain.
Click here to view only most confident match.

Found no structure predictions for this domain.


YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle