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View Structure Prediction Details

Protein: PHB6_ARATH
Organism: Arabidopsis thaliana
Length: 286 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PHB6_ARATH.

Description E-value Query
Range
Subject
Range
PHB_CHICK - Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1
228.0 [0..6] [273..3]

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Predicted Domain #1
Region A:
Residues: [1-216]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNFKNVKVPK GPGGGVIAAV VIGGLSLYGA THTLYNVDGG HRAIVFNRLV GIKDKVYPEG  60
   61 THLMIPWFER PIIYDVRAKP YLVESTSGSR DLQMVKIGLR VLTRPMADQL PEVYRSLGEN 120
  121 YRERVLPSII HETLKAVVAQ YNASQLITQR ESVSREIRKI LTLRAANFHI ALDDVSITGL 180
  181 TFGKEFTAAI EGKQVAAQEA ERAKFIVEKA EQDKRS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 14.09691
Match: 1winA
Description: Solution Structure of the Band 7 Domain of the mouse Flotillin 2 Protein
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 2.10215477176861 bayes_pls_golite062009
protein binding 0.769979871341236 bayes_pls_golite062009
structural molecule activity 0.591437172549816 bayes_pls_golite062009

Predicted Domain #2
Region A:
Residues: [217-286]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AVIRAEGEAK SAQLIGQAIA NNQAFLTLRK IEAAREIAQT ISRSANKVYL SSNDLLLNLQ  60
   61 AMDLDVKPKK 

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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