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View Structure Prediction Details

Protein: ATCA6_ARATH
Organism: Arabidopsis thaliana
Length: 260 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ATCA6_ARATH.

Description E-value Query
Range
Subject
Range
ATCA4_ARATH - Alpha carbonic anhydrase 4 OS=Arabidopsis thaliana GN=ACA4 PE=3 SV=1
260.0 [0..1] [227..1]

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Predicted Domain #1
Region A:
Residues: [1-260]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDANTKTILF FVVFFIDLFS PNILFVYARE IGNKPLFTYK QKTEKGPAEW GKLDPQWKVC  60
   61 STGKIQSPID LTDERVSLIH DQALSKHYKP ASAVIQSRGH DVMVSWKGDG GKITIHQTDY 120
  121 KLVQCHWHSP SEHTINGTSY DLELHMVHTS ASGKTTVVGV LYKLGEPDEF LTKILNGIKG 180
  181 VGKKEIDLGI VDPRDIRFET NNFYRYIGSL TIPPCTEGVI WTVQKRVLYF FCFCYRLIIF 240
  241 VTPYINIFWI FVFVFWCMLM 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 61.221849
Match: 1kopA
Description: Carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.35405414226159 bayes_pls_golite062009
catalytic activity 0.97285738666961 bayes_pls_golite062009
carbon-oxygen lyase activity 0.0641135521348118 bayes_pls_golite062009
hydro-lyase activity 0.0479238316186823 bayes_pls_golite062009
lyase activity 0.0337150119314038 bayes_pls_golite062009
binding 0.017404712980018 bayes_pls_golite062009

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