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View Structure Prediction Details

Protein: SCP37_ARATH
Organism: Arabidopsis thaliana
Length: 487 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SCP37_ARATH.

Description E-value Query
Range
Subject
Range
SCP36_ARATH - Serine carboxypeptidase-like 36 OS=Arabidopsis thaliana GN=SCPL36 PE=2 SV=1
555.0 [0..1] [487..1]

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Predicted Domain #1
Region A:
Residues: [1-487]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKQQDWSVT TCVLLFLFLA SQIHCRSGIH VSKRLEGSKQ GDGKSGDTSF NVLRRVLSPK  60
   61 EKDLIKKLPG QPSGVSFRQY GGYVPVNEPS SRFLYYYFVE AIKPNTSTPL VIWFNGGPAC 120
  121 SSLGGAFLEL GPFRVHSGGR KLFRNPYSWN NEANVLFLES PVTTGFSYSS NPIDLEELGE 180
  181 KGDKATAEDN YIFLMNWLER FPEYKGRDIY IAGQSYAGHY VPQLAQIIIH RNKKTLVNLR 240
  241 GILIGNPSLL TSIQDPYGYE FMLSHGLMSQ QQMDNYNQFC LRDDLYDNDK CALSVKTIDD 300
  301 AKKHLDTYNI YAPVCLNSTL SRISKKCTTV LEVDPCSKDY LKAYLNRKKV QKAIHANTTK 360
  361 LPYEWTSCNN ELTENWSEND RDTPMIPILH ELMGEGVRVM IYNGDVDLEI PFASTLAVVK 420
  421 EMNLTVVKEF RPWFTGGQLG GFTEDYKGNL TFVTVKGAGH SVPTDQPIHA LNIFTSFIRN 480
  481 TPLPHTA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 117.0
Match: 1ivyA
Description: Human 'protective protein', HPP
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity 4.09944423676394 bayes_pls_golite062009
peptidase activity 2.49064988313037 bayes_pls_golite062009
peptidase activity, acting on L-amino acid peptides 2.10044305272656 bayes_pls_golite062009
catalytic activity 1.39629727416851 bayes_pls_golite062009
palmitoyl-(protein) hydrolase activity 1.3250951453762 bayes_pls_golite062009
binding 0.780364496307855 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.541803897301601 bayes_pls_golite062009
endopeptidase activity 0.43631945855397 bayes_pls_golite062009
palmitoyl-CoA hydrolase activity 0.1174692258176 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle