YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ISU1_ARATH
Organism: Arabidopsis thaliana
Length: 167 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ISU1_ARATH.

Description E-value Query
Range
Subject
Range
gi|21595581 - gi|21595581|gb|AAM66114.1| nifU-like protein [Arabidopsis thaliana]
238.0 [0..2] [167..1]

Back

Predicted Domain #1
Region A:
Residues: [1-167]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMLKQAAKKA LGLTSRQSTP WSVGILRTYH ENVIDHYDNP RNVGSFDKND PNVGTGLVGA  60
   61 PACGDVMKLQ IKVDEKTGQI VDARFKTFGC GSAIASSSVA TEWVKGKAME DVLTIKNTEI 120
  121 AKHLSLPPVK LHCSMLAEDA IKAAVKDYKE KRVKTNGAAA AGETTQA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 50.69897
Match: 1q48A
Description: Solution NMR Structure of The Haemophilus Influenzae Iron-Sulfur Cluster Assembly Protein U (IscU) with Zinc Bound at the Active Site. Northeast Structural Genomics Consortium Target IR24. This protein is not apo, it is a model without zinc binding constr
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 1.0206882604253 bayes_pls_golite062009
protein binding 0.380604392484225 bayes_pls_golite062009
catalytic activity 0.256292883613773 bayes_pls_golite062009
2 iron, 2 sulfur cluster binding 0.0439466134407704 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle