| Protein: | FIMB1_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 687 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIMB1_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
576.0 | [0..1] | [687..1] |
|
Region A: Residues: [1-116] |
1 11 21 31 41 51
| | | | | |
1 MSGYVGVVVS DPWLQSQFTQ VELRTLNSKY VSVKNQNGKV TIEDLPPLFA KLKALSATFK 60
61 EDEIKGMLGE LGSDTSTDVS FEEFLKIYLN LLSKAAEKSG GHHKNSSSFL KACTTT
|
| Detection Method: |  |
| Confidence: | 29.69897 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [117-624] |
1 11 21 31 41 51
| | | | | |
1 LLHTIYQSEK GPFVQHINRY LGDDPFLKQF LPLDPHSNQL YELVKDGVLL CKLINVAVPG 60
61 TIDERAINTK RVLNPWERNE NHTLCLNSAK AVGCSVVNIG TQDLAEGRPH LVLGLISQLI 120
121 KIQVLADLNL KKTPQLVELL EDSDDVEELL RLPPEKVLLK WMNFHLKKGG YKKTVSNFSA 180
181 DLKDAQAYAF LLNVLAPEHC DPATLDAKDP LERAELVLSH AERMNCKRYL TAEEIVEGSS 240
241 TLNLAFVAQI FHERNGLNKD GKYAFAEMMT EDVETCRDER CYRLWINSLG IDSYVNNVFE 300
301 DVRNGWILLE VLDKVSPSSV NWKHASKPPI KMPFRKVENC NQVIKIGKQL KFSLVNVAGN 360
361 DIVQGNKKLI LGLLWQLMRF HMLQLLKSLR SRTLGKEMTD ADILSWANRK VRTMGRKLQI 420
421 ESFKDKSLSS GLFFLNLLWA VEPRVVNWNL VTKGETDDEK RLNATYIVSV ARKLGCSVFL 480
481 LPEDIVEVNQ KMILILTASI MYWSLQRH
|
| Detection Method: | |
| Confidence: | 134.0 |
| Match: | 1pxyA |
| Description: | Crystal structure of the actin-crosslinking core of Arabidopsis fimbrin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.50245214720686 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.48140000563569 | bayes_pls_golite062009 |
| actin filament binding | 5.47084878097979 | bayes_pls_golite062009 |
| tubulin binding | 4.22039137964246 | bayes_pls_golite062009 |
| microtubule binding | 4.15537672860167 | bayes_pls_golite062009 |
| binding | 2.8655705697659 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.57886434162184 | bayes_pls_golite062009 |
| protein binding | 2.36488136094907 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.0465241878708 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.32485442580942 | bayes_pls_golite062009 |
| structural molecule activity | 1.00964022808548 | bayes_pls_golite062009 |
|
Region A: Residues: [625-687] |
1 11 21 31 41 51
| | | | | |
1 SRESSDSSST QSTTTTCTST ASSPAPSVTE EEEVSSLSGE VTSLAVGDAV SEITTVSEEA 60
61 SIE
|
| Detection Method: | |
| Confidence: | 80.221849 |
| Match: | 1sjjA |
| Description: | Cryo-EM Structure of Chicken Gizzard Smooth Muscle alpha-Actinin |
Matching Structure (courtesy of the PDB): |
|
