| Protein: | TDR_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1041 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TDR_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
637.0 | [0..34] | [1016..26] |
|
Region A: Residues: [1-89] |
1 11 21 31 41 51
| | | | | |
1 MKKKNISPSL VLHPLLLLLL PFFAFNSLAL KFSPQLLSLL SLKTSLSGPP SAFQDWKVPV 60
61 NGQNDAVWCS WSGVVCDNVT AQVISLDLS
|
| Detection Method: |  |
| Confidence: | 52.0 |
| Match: | 1ogqA |
| Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [90-634] |
1 11 21 31 41 51
| | | | | |
1 HRNLSGRIPI QIRYLSSLLY LNLSGNSLEG SFPTSIFDLT KLTTLDISRN SFDSSFPPGI 60
61 SKLKFLKVFN AFSNNFEGLL PSDVSRLRFL EELNFGGSYF EGEIPAAYGG LQRLKFIHLA 120
121 GNVLGGKLPP RLGLLTELQH MEIGYNHFNG NIPSEFALLS NLKYFDVSNC SLSGSLPQEL 180
181 GNLSNLETLF LFQNGFTGEI PESYSNLKSL KLLDFSSNQL SGSIPSGFST LKNLTWLSLI 240
241 SNNLSGEVPE GIGELPELTT LFLWNNNFTG VLPHKLGSNG KLETMDVSNN SFTGTIPSSL 300
301 CHGNKLYKLI LFSNMFEGEL PKSLTRCESL WRFRSQNNRL NGTIPIGFGS LRNLTFVDLS 360
361 NNRFTDQIPA DFATAPVLQY LNLSTNFFHR KLPENIWKAP NLQIFSASFS NLIGEIPNYV 420
421 GCKSFYRIEL QGNSLNGTIP WDIGHCEKLL CLNLSQNHLN GIIPWEISTL PSIADVDLSH 480
481 NLLTGTIPSD FGSSKTITTF NVSYNQLIGP IPSGSFAHLN PSFFSSNEGL CGDLVGKPCN 540
541 SDRFN
|
| Detection Method: | |
| Confidence: | 12.0 |
| Match: | 2z7xB |
| Description: | No description for 2z7xB was found. |
|
Region A: Residues: [635-706] |
1 11 21 31 41 51
| | | | | |
1 AGNADIDGHH KEERPKKTAG AIVWILAAAI GVGFFVLVAA TRCFQKSYGN RVDGGGRNGG 60
61 DIGPWKLTAF QR
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [707-1041] |
1 11 21 31 41 51
| | | | | |
1 LNFTADDVVE CLSKTDNILG MGSTGTVYKA EMPNGEIIAV KKLWGKNKEN GKIRRRKSGV 60
61 LAEVDVLGNV RHRNIVRLLG CCTNRDCTML LYEYMPNGSL DDLLHGGDKT MTAAAEWTAL 120
121 YQIAIGVAQG ICYLHHDCDP VIVHRDLKPS NILLDADFEA RVADFGVAKL IQTDESMSVV 180
181 AGSYGYIAPE YAYTLQVDKK SDIYSYGVIL LEIITGKRSV EPEFGEGNSI VDWVRSKLKT 240
241 KEDVEEVLDK SMGRSCSLIR EEMKQMLRIA LLCTSRSPTD RPPMRDVLLI LQEAKPKRKT 300
301 VGDNVIVVGD VNDVNFEDVC SVDVGHDVKC QRIGV
|
| Detection Method: | |
| Confidence: | 70.09691 |
| Match: | 2qkwB |
| Description: | No description for 2qkwB was found. |
