Protein: | TDR_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 1041 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TDR_ARATH.
Description | E-value | Query Range |
Subject Range |
|
637.0 | [0..34] | [1016..26] |
Region A: Residues: [1-89] |
1 11 21 31 41 51 | | | | | | 1 MKKKNISPSL VLHPLLLLLL PFFAFNSLAL KFSPQLLSLL SLKTSLSGPP SAFQDWKVPV 60 61 NGQNDAVWCS WSGVVCDNVT AQVISLDLS |
Detection Method: | |
Confidence: | 52.0 |
Match: | 1ogqA |
Description: | Polygalacturonase inhibiting protein PGIP |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [90-634] |
1 11 21 31 41 51 | | | | | | 1 HRNLSGRIPI QIRYLSSLLY LNLSGNSLEG SFPTSIFDLT KLTTLDISRN SFDSSFPPGI 60 61 SKLKFLKVFN AFSNNFEGLL PSDVSRLRFL EELNFGGSYF EGEIPAAYGG LQRLKFIHLA 120 121 GNVLGGKLPP RLGLLTELQH MEIGYNHFNG NIPSEFALLS NLKYFDVSNC SLSGSLPQEL 180 181 GNLSNLETLF LFQNGFTGEI PESYSNLKSL KLLDFSSNQL SGSIPSGFST LKNLTWLSLI 240 241 SNNLSGEVPE GIGELPELTT LFLWNNNFTG VLPHKLGSNG KLETMDVSNN SFTGTIPSSL 300 301 CHGNKLYKLI LFSNMFEGEL PKSLTRCESL WRFRSQNNRL NGTIPIGFGS LRNLTFVDLS 360 361 NNRFTDQIPA DFATAPVLQY LNLSTNFFHR KLPENIWKAP NLQIFSASFS NLIGEIPNYV 420 421 GCKSFYRIEL QGNSLNGTIP WDIGHCEKLL CLNLSQNHLN GIIPWEISTL PSIADVDLSH 480 481 NLLTGTIPSD FGSSKTITTF NVSYNQLIGP IPSGSFAHLN PSFFSSNEGL CGDLVGKPCN 540 541 SDRFN |
Detection Method: | |
Confidence: | 12.0 |
Match: | 2z7xB |
Description: | No description for 2z7xB was found. |
Region A: Residues: [635-706] |
1 11 21 31 41 51 | | | | | | 1 AGNADIDGHH KEERPKKTAG AIVWILAAAI GVGFFVLVAA TRCFQKSYGN RVDGGGRNGG 60 61 DIGPWKLTAF QR |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
Region A: Residues: [707-1041] |
1 11 21 31 41 51 | | | | | | 1 LNFTADDVVE CLSKTDNILG MGSTGTVYKA EMPNGEIIAV KKLWGKNKEN GKIRRRKSGV 60 61 LAEVDVLGNV RHRNIVRLLG CCTNRDCTML LYEYMPNGSL DDLLHGGDKT MTAAAEWTAL 120 121 YQIAIGVAQG ICYLHHDCDP VIVHRDLKPS NILLDADFEA RVADFGVAKL IQTDESMSVV 180 181 AGSYGYIAPE YAYTLQVDKK SDIYSYGVIL LEIITGKRSV EPEFGEGNSI VDWVRSKLKT 240 241 KEDVEEVLDK SMGRSCSLIR EEMKQMLRIA LLCTSRSPTD RPPMRDVLLI LQEAKPKRKT 300 301 VGDNVIVVGD VNDVNFEDVC SVDVGHDVKC QRIGV |
Detection Method: | |
Confidence: | 70.09691 |
Match: | 2qkwB |
Description: | No description for 2qkwB was found. |