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View Structure Prediction Details

Protein: PLCD2_ARATH
Organism: Arabidopsis thaliana
Length: 581 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PLCD2_ARATH.

Description E-value Query
Range
Subject
Range
gi|4588474, gi|1... - gi|4588474|gb|AAD26119.1|AF108123_1 phosphoinositide-specific phospholipase C [Brassica napus], pir|...
560.0 [0..1] [581..1]

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Predicted Domain #1
Region A:
Residues: [1-581]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKQTYKVCF CFRRRFRYTA SEAPREIKTI FEKYSENGVM TVDHLHRFLI DVQKQDKATR  60
   61 EDAQSIINSA SSLLHRNGLH LDAFFKYLFG DNNPPLALHK VHHDMDAPIS HYFIFTGHNS 120
  121 YLTGNQLSSD CSEVPIIDAL KKGVRVIELD IWPNSNKDDI DVLHGMTLTT PVGLIKCLKA 180
  181 IRAHAFDVSD YPVVVTLEDH LTPDLQSKVA EMVTEIFGEI LFTPPVGESL KEFPSPNSLK 240
  241 RRIIISTKPP KEYKEGKDVE VVQKGKDLGD EEVWGREVPS FIQRNKSEAK DDLDGNDDDD 300
  301 DDDDEDKSKI NAPPQYKHLI AIHAGKPKGG ITECLKVDPD KVRRLSLSEE QLEKAAEKYA 360
  361 KQIVRFTQHN LLRIYPKGTR VTSSNYNPLV GWSHGAQMVA FNMQGYGRSL WLMQGMFRAN 420
  421 GGCGYIKKPD LLLKSGSDSD IFDPKATLPV KTTLRVTVYM GEGWYFDFRH THFDQYSPPD 480
  481 FYTRVGIAGV PGDTVMKKTK TLEDNWIPAW DEVFEFPLTV PELALLRLEV HEYDMSEKDD 540
  541 FGGQTCLPVW ELSEGIRAFP LHSRKGEKYK SVKLLVKVEF V

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 152.0
Match: 1djgA
Description: Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1)
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phospholipase C activity 1.68837208308012 bayes_pls_golite062009
hydrolase activity 1.21781019708396 bayes_pls_golite062009
phosphoric diester hydrolase activity 1.06268977958067 bayes_pls_golite062009
catalytic activity 1.05111689766686 bayes_pls_golite062009
phospholipase activity 0.87334512532594 bayes_pls_golite062009
ion transmembrane transporter activity 0.539550637107889 bayes_pls_golite062009
substrate-specific transmembrane transporter activity 0.49944935937406 bayes_pls_golite062009
cation transmembrane transporter activity 0.486374653947972 bayes_pls_golite062009
lipase activity 0.46273678058621 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.273676921589143 bayes_pls_golite062009
phosphoric ester hydrolase activity 0.266794283648202 bayes_pls_golite062009
metal ion transmembrane transporter activity 0.0724768101463518 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle