| Protein: | TRXM4_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 193 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRXM4_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
177.0 | [0..1] | [193..1] |
|
Region A: Residues: [1-85] |
1 11 21 31 41 51
| | | | | |
1 MASLLDSVTV TRVFSLPIAA SVSSSSAAPS VSRRRISPAR FLEFRGLKSS RSLVTQSASL 60
61 GANRRTRIAR GGRIACEAQD TTAAA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.676 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.457 | a.4.5 | "Winged helix" DNA-binding domain |
| View | Download | 0.420 | d.74.2 | C-terminal domain of arginine repressor |
| View | Download | 0.415 | a.6.1 | Putative DNA-binding domain |
| View | Download | 0.399 | d.15.8 | Translation initiation factor IF3, N-terminal domain |
|
Region A: Residues: [86-193] |
1 11 21 31 41 51
| | | | | |
1 VEVPNLSDSE WQTKVLESDV PVLVEFWAPW CGPCRMIHPI VDQLAKDFAG KFKFYKINTD 60
61 ESPNTANRYG IRSVPTVIIF KGGEKKDSII GAVPRETLEK TIERFLVE
|
| Detection Method: | |
| Confidence: | 30.0 |
| Match: | 1fb0A |
| Description: | Thioredoxin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| antioxidant activity | 3.8464796631544 | bayes_pls_golite062009 |
| peroxidase activity | 3.43831566988273 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on peroxide as acceptor | 3.43831566988273 | bayes_pls_golite062009 |
| oxidoreductase activity | 2.63737118711715 | bayes_pls_golite062009 |
| glutathione peroxidase activity | 2.56524997297011 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on sulfur group of donors | 2.23310780102446 | bayes_pls_golite062009 |
| peroxiredoxin activity | 2.12777217096121 | bayes_pls_golite062009 |
| selenium binding | 1.97148144306198 | bayes_pls_golite062009 |
| thioredoxin peroxidase activity | 1.96134566495756 | bayes_pls_golite062009 |
| protein disulfide oxidoreductase activity | 1.47769936616412 | bayes_pls_golite062009 |
| disulfide oxidoreductase activity | 1.32811008894503 | bayes_pls_golite062009 |
| binding | 0.704132579378598 | bayes_pls_golite062009 |
| catalytic activity | 0.129588295266429 | bayes_pls_golite062009 |
| oxidoreductase activity, acting on NADH or NADPH | 0.0801269279614203 | bayes_pls_golite062009 |
