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View Structure Prediction Details

Protein: TRXH2_ARATH
Organism: Arabidopsis thaliana
Length: 133 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRXH2_ARATH.

Description E-value Query
Range
Subject
Range
gi|21595244 - gi|21595244|gb|AAM66084.1| thioredoxin [Arabidopsis thaliana]
139.0 [0..1] [133..1]

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Predicted Domain #1
Region A:
Residues: [1-133]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGALSTVFG SGEDATAAGT ESEPSRVLKF SSSARWQLHF NEIKESNKLL VVDFSASWCG  60
   61 PCRMIEPAIH AMADKFNDVD FVKLDVDELP DVAKEFNVTA MPTFVLVKRG KEIERIIGAK 120
  121 KDELEKKVSK LRA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 29.09691
Match: 1xflA
Description: Solution Structure of Thioredoxin h1 from Arabidopsis Thaliana
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
antioxidant activity 3.8464796631544 bayes_pls_golite062009
peroxidase activity 3.43831566988273 bayes_pls_golite062009
oxidoreductase activity, acting on peroxide as acceptor 3.43831566988273 bayes_pls_golite062009
glutathione peroxidase activity 2.56524997297011 bayes_pls_golite062009
oxidoreductase activity, acting on sulfur group of donors 2.23310780102446 bayes_pls_golite062009
peroxiredoxin activity 2.12777217096121 bayes_pls_golite062009
selenium binding 1.97148144306198 bayes_pls_golite062009
thioredoxin peroxidase activity 1.96134566495756 bayes_pls_golite062009
protein disulfide oxidoreductase activity 1.47769936616412 bayes_pls_golite062009
disulfide oxidoreductase activity 1.32811008894503 bayes_pls_golite062009
binding 1.25802922431343 bayes_pls_golite062009
transcription regulator activity 0.96297634785608 bayes_pls_golite062009
catalytic activity 0.672192331361968 bayes_pls_golite062009
hydrolase activity 0.620302638089385 bayes_pls_golite062009
glutathione binding 0.2456976890622 bayes_pls_golite062009
protein binding 0.134341907247724 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle