| Protein: | RS122_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 144 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for RS122_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
179.0 | [0..20] | [142..229] |
|
Region A: Residues: [1-144] |
1 11 21 31 41 51
| | | | | |
1 MSGDEAVAAP VVPPVAEAAV IPEDMDVSTA LELTVRKSRA YGGVVRGLHE SAKLIEKRNA 60
61 QLCVLAEDCN QPDYVKLVKA LCADHSIKLL TVPSAKTLGE WAGLCKIDSE GNARKVVGCS 120
121 CLVIKDFGEE TTALNIVKKH LDSN
|
| Detection Method: |  |
| Confidence: | 24.69897 |
| Match: | 2aifA |
| Description: | Crystal Structure of High Mobility Like Protein, NHP2, putative from Cryptosporidium parvum |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| structural constituent of ribosome | 7.52323416912124 | bayes_pls_golite062009 |
| structural molecule activity | 6.97581143389173 | bayes_pls_golite062009 |
| RNA binding | 3.17103797166833 | bayes_pls_golite062009 |
| nucleic acid binding | 1.89156659324072 | bayes_pls_golite062009 |
| binding | 1.31970199852267 | bayes_pls_golite062009 |
| 0.61812240381857 | bayes_pls_golite062009 | |
| catalytic activity | 0.264002643439785 | bayes_pls_golite062009 |
| mRNA binding | 0.259807967594031 | bayes_pls_golite062009 |
| protein binding | 0.128962984939985 | bayes_pls_golite062009 |
