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View Structure Prediction Details

Protein: PUR3_ARATH
Organism: Arabidopsis thaliana
Length: 292 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PUR3_ARATH.

Description E-value Query
Range
Subject
Range
gi|29607500, gi|... - gi|29830389|ref|NP_825023.1| formyltetrahydrofolate deformylase [Streptomyces avermitilis MA-4680], ...
269.0 [0..2] [283..39]

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Predicted Domain #1
Region A:
Residues: [1-77]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESRVLFSSQ FNFPVNSPFK TRETSIAPLT PSRNVLSFSF RSPAERCAMR IVPLVKAASS  60
   61 TPQIVAEVDG SSHEPRR

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [78-292]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 KKLAVFVSGG GSNFRKIHEG CSDGSVNGDV VLLVTNKKDC GGAEYARSNG IPVLVFPKAK  60
   61 REPSDGLSPS ELVDVLRKYG VDFVLLAGYL KLIPVELVQA FPKRILNIHP ALLPAFGGKG 120
  121 LYGIKVHKAV LESGARYSGP TIHFVNEEYD TGRILAQSAV RVIANDTPEE LAKRVLHEEH 180
  181 KLYVEVVGAI CEERIKWRED GVPLIQNKQN PDEYY

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 56.30103
Match: 1c3eA
Description: Glycinamide ribonucleotide transformylase, GART
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
methyltransferase activity 4.09881190860822 bayes_pls_golite062009
transferase activity, transferring one-carbon groups 4.01667310557403 bayes_pls_golite062009
hydroxymethyl-, formyl- and related transferase activity 3.81159871979977 bayes_pls_golite062009
glycine hydroxymethyltransferase activity 3.49010887242285 bayes_pls_golite062009
phosphoribosylglycinamide formyltransferase activity 2.94311083909314 bayes_pls_golite062009
methionyl-tRNA formyltransferase activity 2.39150724300118 bayes_pls_golite062009
catalytic activity 2.16003793103722 bayes_pls_golite062009
binding 1.1813924954238 bayes_pls_golite062009
transferase activity 1.01502594768782 bayes_pls_golite062009
ligase activity 0.922788719307786 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle