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View Structure Prediction Details

Protein: PMG1_ARATH
Organism: Arabidopsis thaliana
Length: 557 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PMG1_ARATH.

Description E-value Query
Range
Subject
Range
GPMI2_METAC, GMI... - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans GN=gpmI2...
GPMI2_METAC - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 2 OS=Methanosarcina acetivorans (strain ...
644.0 [0..16] [554..9]

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Predicted Domain #1
Region A:
Residues: [1-557]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSSAWKLD DHPKLPKGKT IAVIVLDGWG ESAPDQYNCI HNAPTPAMDS LKHGAPDTWT  60
   61 LIKAHGTAVG LPSEDDMGNS EVGHNALGAG RIFAQGAKLC DQALASGKIF EGEGFKYVSE 120
  121 SFETNTLHLV GLLSDGGVHS RLDQLQLLIK GSAERGAKRI RVHILTDGRD VLDGSSVGFV 180
  181 ETLEADLVAL RENGVDAQIA SGGGRMYVTL DRYENDWEVV KRGWDAQVLG EAPHKFKNAV 240
  241 EAVKTLRKEP GANDQYLPPF VIVDESGKAV GPIVDGDAVV TFNFRADRMV MHAKALEYED 300
  301 FDKFDRVRYP KIRYAGMLQY DGELKLPSRY LVSPPEIDRT SGEYLTHNGV STFACSETVK 360
  361 FGHVTFFWNG NRSGYFNEKL EEYVEIPSDS GISFNVQPKM KALEIGEKAR DAILSGKFDQ 420
  421 VRVNIPNGDM VGHTGDIEAT VVACEAADLA VKMIFDAIEQ VKGIYVVTAD HGNAEDMVKR 480
  481 DKSGKPALDK EGKLQILTSH TLKPVPIAIG GPGLAQGVRF RKDLETPGLA NVAATVMNLH 540
  541 GFVAPSDYEP TLIEVVE

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 180.0
Match: 1ejjA
Description: 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, substrate-binding domain; 2,3-Bisphosphoglycerate-independent phosphoglycerate mutase, catalytic domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
phosphoglycerate mutase activity 4.09705445001692 bayes_pls_golite062009
hydrolase activity 3.01886601704869 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 2.80771517640162 bayes_pls_golite062009
catalytic activity 2.31328968099128 bayes_pls_golite062009
intramolecular transferase activity, phosphotransferases 1.84947276418569 bayes_pls_golite062009
binding 0.727515968610877 bayes_pls_golite062009
intramolecular transferase activity 0.343539964510921 bayes_pls_golite062009
protein binding 0.0855749430431131 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle