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View Structure Prediction Details

Protein: KIN10_ARATH
Organism: Arabidopsis thaliana
Length: 535 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for KIN10_ARATH.

Description E-value Query
Range
Subject
Range
gi|322596, gi|11... - gi|6714479|gb|AAF26165.1|AC008261_22 putative SNF1-related protein kinase [Arabidopsis thaliana], pi...
519.0 [0..24] [535..1]

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Predicted Domain #1
Region A:
Residues: [1-312]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKRVDEFNL VSSTIDHRIF KSRMDGSGTG SRSGVESILP NYKLGRTLGI GSFGRVKIAE  60
   61 HALTGHKVAI KILNRRKIKN MEMEEKVRRE IKILRLFMHP HIIRLYEVIE TPTDIYLVME 120
  121 YVNSGELFDY IVEKGRLQED EARNFFQQII SGVEYCHRNM VVHRDLKPEN LLLDSKCNVK 180
  181 IADFGLSNIM RDGHFLKTSC GSPNYAAPEV ISGKLYAGPE VDVWSCGVIL YALLCGTLPF 240
  241 DDENIPNLFK KIKGGIYTLP SHLSPGARDL IPRMLVVDPM KRVTIPEIRQ HPWFQAHLPR 300
  301 YLAVPPPDTV QQ

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 78.522879
Match: 2fh9A
Description: No description for 2fh9A was found.

Predicted Domain #2
Region A:
Residues: [313-378]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 AKKIDEEILQ EVINMGFDRN HLIESLRNRT QNDGTVTYYL ILDNRFRASS GYLGAEFQET  60
   61 MEGTPR

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.14
Match: 2cpwA
Description: Solution structure of RSGI RUH-031, a UBA domain from human cDNA
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
transcription regulator activity 2.36949910682766 bayes_pls_golite062009
binding 2.36429435103114 bayes_pls_golite062009
protein binding 2.06619290708535 bayes_pls_golite062009
DNA binding 2.0124319122573 bayes_pls_golite062009
nucleic acid binding 1.91576114591492 bayes_pls_golite062009
enzyme binding 0.973545763884891 bayes_pls_golite062009
hydrolase activity 0.835394858232114 bayes_pls_golite062009
small conjugating protein binding 0.678408535705177 bayes_pls_golite062009
ubiquitin binding 0.319972124839967 bayes_pls_golite062009
catalytic activity 0.2736776367506 bayes_pls_golite062009
damaged DNA binding 0.0421213942095382 bayes_pls_golite062009
transcription factor binding 0.00604949932390486 bayes_pls_golite062009

Predicted Domain #3
Region A:
Residues: [379-535]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHPAESVASP VSHRLPGLME YQGVGLRSQY PVERKWALGL QSRAHPREIM TEVLKALQDL  60
   61 NVCWKKIGHY NMKCRWVPNS SADGMLSNSM HDNNYFGDES SIIENEAAVK SPNVVKFEIQ 120
  121 LYKTRDDKYL LDLQRVQGPQ FLFLDLCAAF LAQLRVL

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 15.39794
Match: 2qlvA
Description: No description for 2qlvA was found.

YRC Informatics Platform - Version 3.0
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