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View Structure Prediction Details

Protein: CSK2E_ARATH
Organism: Arabidopsis thaliana
Length: 283 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CSK2E_ARATH.

Description E-value Query
Range
Subject
Range
gi|20259992, gi|... - gi|30689795|ref|NP_850421.1| CKB4 (CASEIN KINASE II BETA SUBUNIT 4); protein serine/threonine kinase...
467.0 [0..1] [283..1]

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Predicted Domain #1
Region A:
Residues: [1-83]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYKDRSGGGI MGGGGSSRSE ILGGAIDRKR INDALDKHLK KSSPSTSRVF TSKDKDSVPS  60
   61 TSTAKSQLHS RSPDVESDTD SEG

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [84-283]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SDVSGSEGDD TSWISWFCNL RGNEFFCEVD EDYIQDDFNL CGLSGQVPYY DYALDLILDV  60
   61 ESSNGDMFTE EQHEMVESAA EMLYGLIHVR YILTTKGMAA MMEKYKNYDF GRCPRVFCCG 120
  121 QSCLPVGQSD IPRSSTVKIY CPKCEDIYYP RSKYQGNIDG AYFGTTFPHL FLMAYGNMKP 180
  181 QKPAQNYVPK IFGFKVHNKQ 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 105.0
Match: 1jwhC
Description: Casein kinase II beta subunit
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
protein kinase regulator activity 4.14878012076359 bayes_pls_golite062009
kinase regulator activity 4.09603095102334 bayes_pls_golite062009
enzyme regulator activity 2.91779610785511 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 2.79245883940915 bayes_pls_golite062009
protein kinase activity 2.75473427458132 bayes_pls_golite062009
kinase activity 2.66515798949431 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 2.39333807060713 bayes_pls_golite062009
protein serine/threonine kinase activity 1.99491617326192 bayes_pls_golite062009
binding 1.85951177140712 bayes_pls_golite062009
transferase activity 1.77218599619559 bayes_pls_golite062009
protein binding 1.4657010373022 bayes_pls_golite062009
catalytic activity 0.2012862421225 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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