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View Structure Prediction Details

Protein: GLGS_ARATH
Organism: Arabidopsis thaliana
Length: 520 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLGS_ARATH.

Description E-value Query
Range
Subject
Range
gi|7671230 - gi|7671230|gb|AAF66434.1|AF249915_1 ADP-glucose pyrophosphorylase catalytic subunit [Perilla frutesc...
380.0 [0..4] [520..1]

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Predicted Domain #1
Region A:
Residues: [1-84]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASVSAIGVL KVPPASTSNS TGKATEAVPT RTLSFSSSVT SSDDKISLKS TVSRLCKSVV  60
   61 RRNPIIVSPK AVSDSQNSQT CLDP

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [85-520]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 DASSSVLGII LGGGAGTRLY PLTKKRAKPA VPLGANYRLI DIPVSNCLNS NISKIYVLTQ  60
   61 FNSASLNRHL SRAYASNMGG YKNEGFVEVL AAQQSPENPN WFQGTADAVR QYLWLFEEHN 120
  121 VLEYLILAGD HLYRMDYEKF IQAHRETDAD ITVAALPMDE QRATAFGLMK IDEEGRIIEF 180
  181 AEKPKGEHLK AMKVDTTILG LDDQRAKEMP FIASMGIYVV SRDVMLDLLR NQFPGANDFG 240
  241 SEVIPGATSL GLRVQAYLYD GYWEDIGTIE AFYNANLGIT KKPVPDFSFY DRSAPIYTQP 300
  301 RYLPPSKMLD ADVTDSVIGE GCVIKNCKIH HSVVGLRSCI SEGAIIEDSL LMGADYYETA 360
  361 TEKSLLSAKG SVPIGIGKNS HIKRAIIDKN ARIGDNVKII NSDNVQEAAR ETDGYFIKSG 420
  421 IVTVIKDALI PTGTVI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 88.221849
Match: 1yp2A
Description: Crystal structure of potato tuber ADP-glucose pyrophosphorylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 2.59855937987599 bayes_pls_golite062009
acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity 2.31513836185329 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 2.04393180556087 bayes_pls_golite062009
O-acyltransferase activity 1.75961983651531 bayes_pls_golite062009
UDP-glycosyltransferase activity 1.51711005399931 bayes_pls_golite062009
cytidylyltransferase activity 1.46439247968206 bayes_pls_golite062009
transferase activity 1.3237300007392 bayes_pls_golite062009
glucose-1-phosphate adenylyltransferase activity 1.1107654322416 bayes_pls_golite062009
acyltransferase activity 1.1088759555825 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.10852250644129 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.886009567107207 bayes_pls_golite062009
3-deoxy-manno-octulosonate cytidylyltransferase activity 0.83115346830439 bayes_pls_golite062009
nucleotidyltransferase activity 0.67147527259372 bayes_pls_golite062009
uridylyltransferase activity 0.54930147038803 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 0.48277064848483 bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity 0.38929738612511 bayes_pls_golite062009
glucose-1-phosphate thymidylyltransferase activity 0.204810937394121 bayes_pls_golite062009
guanylyltransferase activity 0.14847697203788 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 0.10541627748542 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle