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View Structure Prediction Details

Protein: GLGL4_ARATH
Organism: Arabidopsis thaliana
Length: 523 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GLGL4_ARATH.

Description E-value Query
Range
Subject
Range
gi|83630947, gi|... - gi|83630947|gb|ABC26922.1| ADPglucose pyrophosphorylase large subunit [Solanum lycopersicum], gi|836...
353.0 [0..1] [523..1]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSSYSFALG TSSSILPKLS FRNVENRFYG EKNNNNGLCK RFGSDLGSKK FRNQKFKHGV  60
   61 VYAVATSDNP KKAMTVKTSM FERRK

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 5.045757
Match: 1vrdA
Description: Crystal structure of Inosine-5'-monophosphate dehydrogenase (TM1347) from THERMOTOGA MARITIMA at 2.18 A resolution
Matching Structure (courtesy of the PDB):

Predicted Domain #2
Region A:
Residues: [86-523]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VDPQNVAAII LGGGNGAKLF PLTMRAATPA VPVGGCYRLI DIPMSNCINS CINKIFVLTQ  60
   61 FNSASLNRHL ARTYFGNGIN FGGGFVEVLA ATQTPGEAGK KWFQGTADAV RKFLWVFEDA 120
  121 KNRNIENILI LSGDHLYRMN YMDFVQSHVD SNADITLSCA PVSESRASNF GLVKIDRGGR 180
  181 VIHFSEKPTG VDLKSMQTDT TMLGLSHQEA TDSPYIASMG VYCFKTEALL NLLTRQYPSS 240
  241 NDFGSEVIPA AIRDHDVQGY IFRDYWEDIG TIKTFYEANL ALVEERPKFE FYDPETPFYT 300
  301 SPRFLPPTKA EKCRMVDSII SHGCFLRECS VQRSIIGERS RLDYGVELQD TLMLGADYYQ 360
  361 TESEIASLLA EGKVPIGIGK DTKIRKCIID KNAKIGKNVI IMNKGDVQEA DRPEEGFYIR 420
  421 SGITVIVEKA TIQDGTVI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 68.09691
Match: 1yp2A
Description: Crystal structure of potato tuber ADP-glucose pyrophosphorylase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
acyl-[acyl-carrier-protein]-UDP-N-acetylglucosamine O-acyltransferase activity 2.31513836185329 bayes_pls_golite062009
catalytic activity 2.25720704697246 bayes_pls_golite062009
transferase activity, transferring hexosyl groups 2.04393180556087 bayes_pls_golite062009
O-acyltransferase activity 1.75961983651531 bayes_pls_golite062009
transferase activity 1.67251862595728 bayes_pls_golite062009
UDP-glycosyltransferase activity 1.51711005399931 bayes_pls_golite062009
cytidylyltransferase activity 1.46439247968206 bayes_pls_golite062009
transferase activity, transferring glycosyl groups 1.21894113759929 bayes_pls_golite062009
glucose-1-phosphate adenylyltransferase activity 1.1107654322416 bayes_pls_golite062009
acyltransferase activity 1.1088759555825 bayes_pls_golite062009
transferase activity, transferring acyl groups other than amino-acyl groups 1.10852250644129 bayes_pls_golite062009
transferase activity, transferring acyl groups 0.886009567107207 bayes_pls_golite062009
3-deoxy-manno-octulosonate cytidylyltransferase activity 0.83115346830439 bayes_pls_golite062009
UDP-N-acetylglucosamine diphosphorylase activity 0.696745721981411 bayes_pls_golite062009
nucleotidyltransferase activity 0.67147527259372 bayes_pls_golite062009
uridylyltransferase activity 0.54930147038803 bayes_pls_golite062009
acetylgalactosaminyltransferase activity 0.48277064848483 bayes_pls_golite062009
mannose-phosphate guanylyltransferase activity 0.38929738612511 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.280335197569099 bayes_pls_golite062009
glucose-1-phosphate thymidylyltransferase activity 0.204810937394121 bayes_pls_golite062009
guanylyltransferase activity 0.14847697203788 bayes_pls_golite062009
polypeptide N-acetylgalactosaminyltransferase activity 0.10541627748542 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle