Protein: | GL1_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 228 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for GL1_ARATH.
Description | E-value | Query Range |
Subject Range |
|
226.0 | [0..1] | [228..1] |
Region A: Residues: [1-125] |
1 11 21 31 41 51 | | | | | | 1 MRIRRRDEKE NQEYKKGLWT VEEDNILMDY VLNHGTGQWN RIVRKTGLKR CGKSCRLRWM 60 61 NYLSPNVNKG NFTEQEEDLI IRLHKLLGNR WSLIAKRVPG RTDNQVKNYW NTHLSKKLVG 120 121 DYSSA |
Detection Method: | |
Confidence: | 31.69897 |
Match: | 1h88C |
Description: | c-Myb, DNA-binding domain |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
binding | 0.334577365229545 | bayes_pls_golite062009 |
transcription regulator activity | 0.0696342306231097 | bayes_pls_golite062009 |
Region A: Residues: [126-228] |
1 11 21 31 41 51 | | | | | | 1 VKTTGEDDDS PPSLFITAAT PSSCHHQQEN IYENIAKSFN GVVSASYEDK PKQELAQKDV 60 61 LMATTNDPSH YYGNNALWVH DDDFELSSLV MMNFASGDVE YCL |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
MCM Score |
SCOP Match |
SCOP Description | ||
View | Download | 0.552 | g.52.1 | Inhibitor of apoptosis (IAP) repeat |
View | Download | 0.523 | a.24.15 | FAD-dependent thiol oxidase |
View | Download | 0.502 | a.4.1 | Homeodomain-like |
View | Download | 0.498 | a.1.1 | Globin-like |
View | Download | 0.489 | g.52.1 | Inhibitor of apoptosis (IAP) repeat |