| Protein: | CRY2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 612 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CRY2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
599.0 | [0..1] | [612..1] |
|
Region A: Residues: [1-536] |
1 11 21 31 41 51
| | | | | |
1 MKMDKKTIVW FRRDLRIEDN PALAAAAHEG SVFPVFIWCP EEEGQFYPGR ASRWWMKQSL 60
61 AHLSQSLKAL GSDLTLIKTH NTISAILDCI RVTGATKVVF NHLYDPVSLV RDHTVKEKLV 120
121 ERGISVQSYN GDLLYEPWEI YCEKGKPFTS FNSYWKKCLD MSIESVMLPP PWRLMPITAA 180
181 AEAIWACSIE ELGLENEAEK PSNALLTRAW SPGWSNADKL LNEFIEKQLI DYAKNSKKVV 240
241 GNSTSLLSPY LHFGEISVRH VFQCARMKQI IWARDKNSEG EESADLFLRG IGLREYSRYI 300
301 CFNFPFTHEQ SLLSHLRFFP WDADVDKFKA WRQGRTGYPL VDAGMRELWA TGWMHNRIRV 360
361 IVSSFAVKFL LLPWKWGMKY FWDTLLDADL ECDILGWQYI SGSIPDGHEL DRLDNPALQG 420
421 AKYDPEGEYI RQWLPELARL PTEWIHHPWD APLTVLKASG VELGTNYAKP IVDIDTAREL 480
481 LAKAISRTRE AQIMIGAAPD EIVADSFEAL GANTIKEPGL CPSVSSNDQQ VPSAVR
|
| Detection Method: |  |
| Confidence: | 124.0 |
| Match: | 1u3cA |
| Description: | Crystal Structure of the PHR domain of Cryptochrome 1 from Arabidopsis thaliana |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| blue light photoreceptor activity | 9.1431674572348 | bayes_pls_golite062009 |
| photoreceptor activity | 8.36697703010092 | bayes_pls_golite062009 |
| DNA photolyase activity | 5.59238172310626 | bayes_pls_golite062009 |
| transcription repressor activity | 4.08500855631983 | bayes_pls_golite062009 |
| transcription regulator activity | 3.49617875539388 | bayes_pls_golite062009 |
| nucleic acid binding | 2.19167058827256 | bayes_pls_golite062009 |
| binding | 2.13238451443633 | bayes_pls_golite062009 |
| G-protein coupled photoreceptor activity | 2.1101484978621 | bayes_pls_golite062009 |
| DNA binding | 2.05514577638135 | bayes_pls_golite062009 |
| deoxyribodipyrimidine photo-lyase activity | 2.01343813518186 | bayes_pls_golite062009 |
| FAD binding | 1.81559602758107 | bayes_pls_golite062009 |
| catalytic activity | 0.609980967042895 | bayes_pls_golite062009 |
| damaged DNA binding | 0.5555984473366 | bayes_pls_golite062009 |
| protein binding | 0.452275661161724 | bayes_pls_golite062009 |
|
Region A: Residues: [537-612] |
1 11 21 31 41 51
| | | | | |
1 YNGSKRVKPE EEEERDMKKS RGFDERELFS TAESSSSSSV FFVSQSCSLA SEGKNLEGIQ 60
61 DSSDQITTSL GKNGCK
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
