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View Structure Prediction Details

Protein: CH10_ARATH
Organism: Arabidopsis thaliana
Length: 98 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CH10_ARATH.

Description E-value Query
Range
Subject
Range
gi|27353501, gi|... - gi|27380337|ref|NP_771866.1| co-chaperonin GroES [Bradyrhizobium japonicum USDA 110], gi|27353501|db...
146.0 [0..1] [97..1]

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Predicted Domain #1
Region A:
Residues: [1-98]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMKRLIPTFN RILVQRVIQP AKTESGILLP EKSSKLNSGK VIAVGPGSRD KDGKLIPVSV  60
   61 KEGDTVLLPE YGGTQVKLGE NEYHLFRDED VLGTLHED

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 28.69897
Match: 1wnrA
Description: Crystal structure of the Cpn10 from Thermus thermophilus HB8
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
chaperone binding 3.52404463833595 bayes_pls_golite062009
unfolded protein binding 2.30823619318536 bayes_pls_golite062009
binding 2.29520443217747 bayes_pls_golite062009
protein binding 1.35579823286173 bayes_pls_golite062009
catalytic activity 0.217171374336363 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle