| Protein: | CAP8_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 571 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAP8_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
413.0 | [0..1] | [570..1] |
|
Region A: Residues: [1-330] |
1 11 21 31 41 51
| | | | | |
1 MGTLQSWRKA YGALKDSTKV GLVRVNSEYA DLDVAIVKAT NHVECPPKDR HLRKIFAATS 60
61 VTRARADVAY CIHALSRRLH KTRNWTVALK TLIVIHRLLR EGDPTFREEL LNFSQRGRIL 120
121 QLSNFKDDSS PIAWDCSAWV RTYALFLEER LECFRVLKYD TEAERLPKSN PGQDKGYSRT 180
181 RDLDGEELLE QLPALQQLLY RLIGCRPEGA ANHNHVIQYA LALVLKESFK VYCAINDGII 240
241 NLIDKFFEMA KHEAITSLEI YKRAGQQARS LSDFYEACKG LELARNFQFP VLREPPQSFL 300
301 TTMEEYIKEA PRVVDVPAEP LLLTYRPDDG
|
| Detection Method: |  |
| Confidence: | 85.69897 |
| Match: | 1hf8A |
| Description: | Clathrin assembly lymphoid myeloid leukaemia protein, Calm |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.229007340928547 | bayes_pls_golite062009 |
|
Region A: Residues: [331-397] |
1 11 21 31 41 51
| | | | | |
1 LTTEDTEPSH EEREMLPSDD VVVVSEETEP SPPPPPSANA QNFIDTDDLW GLNTGAPDTS 60
61 VIEDQNA
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [398-571] |
1 11 21 31 41 51
| | | | | |
1 LALAIVSTDA DPPTPHFGQP NNYDPTGWEL ALVTAPSSDI SASTERKLAG GLDTLTLSSL 60
61 YDDGAYIASQ RPVYGAPAPN PFASHDPFAS SNGTAPPPQQ QAVNNPFGAY QQTYQHQPQP 120
121 TYQHQSNPPT NNSNPFGDFG EFPVNPVSQQ PNTSGYGDFS VNQHNNPFRS TGLI
|
| Detection Method: | |
| Confidence: | 6.154902 |
| Match: | 1m2vB |
| Description: | Sec24 |
Matching Structure (courtesy of the PDB): |
|
