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View Structure Prediction Details

Protein: CAH2_ARATH
Organism: Arabidopsis thaliana
Length: 259 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CAH2_ARATH.

Description E-value Query
Range
Subject
Range
BCA2_ARATH - Beta carbonic anhydrase 2, chloroplastic OS=Arabidopsis thaliana GN=BCA2 PE=1 SV=3
347.0 [0..1] [259..73]

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Predicted Domain #1
Region A:
Residues: [1-259]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNESYEDAI EALKKLLIEK DDLKDVAAAK VKKITAELQA ASSSDSKSFD PVERIKEGFV  60
   61 TFKKEKYETN PALYGELAKG QSPKYMVFAC SDSRVCPSHV LDFHPGDAFV VRNIANMVPP 120
  121 FDKVKYAGVG AAIEYAVLHL KVENIVVIGH SACGGIKGLM SFPLDGNNST DFIEDWVKIC 180
  181 LPAKSKVLAE SESSAFEDQC GRCEREAVNV SLANLLTYPF VREGVVKGTL ALKGGYYDFV 240
  241 NGSFELWELQ FGISPVHSI

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 1ekjA
Description: beta-carbonic anhydrase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
carbonate dehydratase activity 2.96380803089124 bayes_pls_golite062009
catalytic activity 1.85658156053797 bayes_pls_golite062009
carbon-oxygen lyase activity 1.691366175135 bayes_pls_golite062009
hydro-lyase activity 1.65497918079842 bayes_pls_golite062009
lyase activity 1.62374861994341 bayes_pls_golite062009
binding 1.32962036184517 bayes_pls_golite062009
protein binding 0.132818074687599 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle