| Protein: | AP2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 432 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
276.0 | [0..1] | [432..1] |
|
|
245.0 | [0..10] | [430..54] |
|
|
237.0 | [0..15] | [430..84] |
|
|
237.0 | [0..8] | [397..163] |
|
|
231.0 | [0..1] | [431..2] |
|
|
231.0 | [0..7] | [397..159] |
|
|
217.0 | [0..1] | [428..1] |
|
|
215.0 | [0..1] | [431..2] |
|
Region A: Residues: [1-109] |
1 11 21 31 41 51
| | | | | |
1 MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL 60
61 VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS AGKATNVAA
|
| Detection Method: |  |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
Found no structure predictions for this domain.
|
Region A: Residues: [110-219] |
1 11 21 31 41 51
| | | | | |
1 AVVEPAQPLK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA 60
61 YDRAAIKFRG VEADINFNID DYDDDLKQMT NLTKEEFVHV LRRQSTGFPR
|
| Detection Method: | |
| Confidence: | 4.43 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [220-364] |
1 11 21 31 41 51
| | | | | |
1 GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEVEA ARAYDKAAIK CNGKDAVTNF 60
61 DPSIYDEELN AESSGNPTTP QDHNLDLSLG NSANSKHKSQ DMRLRMNQQQ QDSLHSNEVL 120
121 GLGQTGMLNH TPNSNHQFPG SSNIG
|
| Detection Method: | |
| Confidence: | 21.69897 |
| Match: | 2gccA |
| Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
| Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [365-432] |
1 11 21 31 41 51
| | | | | |
1 SGGGFSLFPA AENHRFDGRA STNQVLTNAA ASSGFSPHHH NQIFNSTSTP HQNWLQTNGF 60
61 QPPLMRPS
|
| Detection Method: | |
Shown below are all of our de novo (Rosetta) predictions for this domain.
Click here to view only most confident match.
| MCM Score |
SCOP Match |
SCOP Description | ||
| View | Download | 0.693 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.693 | a.179.1 | Replisome organizer (g39p helicase loader/inhibitor protein) |
| View | Download | 0.623 | a.35.1 | lambda repressor-like DNA-binding domains |
| View | Download | 0.531 | a.65.1 | Annexin |
| View | Download | 0.531 | a.65.1 | Annexin |
| View | Download | 0.512 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.512 | a.144.1 | PABC (PABP) domain |
| View | Download | 0.501 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.501 | a.163.1 | Crustacean CHH/MIH/GIH neurohormone |
| View | Download | 0.407 | c.10.2 | L domain-like |
