Protein: | AP2_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 432 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for AP2_ARATH.
Description | E-value | Query Range |
Subject Range |
|
276.0 | [0..1] | [432..1] |
|
245.0 | [0..10] | [430..54] |
|
237.0 | [0..15] | [430..84] |
|
237.0 | [0..8] | [397..163] |
|
231.0 | [0..1] | [431..2] |
|
231.0 | [0..7] | [397..159] |
|
217.0 | [0..1] | [428..1] |
|
215.0 | [0..1] | [431..2] |
Region A: Residues: [1-109] |
1 11 21 31 41 51 | | | | | | 1 MWDLNDAPHQ TQREEESEEF CYSSPSKRVG SFSNSSSSAV VIEDGSDDDE LNRVRPNNPL 60 61 VTHQFFPEMD SNGGGVASGF PRAHWFGVKF CQSDLATGSS AGKATNVAA |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [110-219] |
1 11 21 31 41 51 | | | | | | 1 AVVEPAQPLK KSRRGPRSRS SQYRGVTFYR RTGRWESHIW DCGKQVYLGG FDTAHAAARA 60 61 YDRAAIKFRG VEADINFNID DYDDDLKQMT NLTKEEFVHV LRRQSTGFPR |
Detection Method: | |
Confidence: | 4.43 |
Match: | 2gccA |
Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [220-364] |
1 11 21 31 41 51 | | | | | | 1 GSSKYRGVTL HKCGRWEARM GQFLGKKYVY LGLFDTEVEA ARAYDKAAIK CNGKDAVTNF 60 61 DPSIYDEELN AESSGNPTTP QDHNLDLSLG NSANSKHKSQ DMRLRMNQQQ QDSLHSNEVL 120 121 GLGQTGMLNH TPNSNHQFPG SSNIG |
Detection Method: | |
Confidence: | 21.69897 |
Match: | 2gccA |
Description: | SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [365-432] |
1 11 21 31 41 51 | | | | | | 1 SGGGFSLFPA AENHRFDGRA STNQVLTNAA ASSGFSPHHH NQIFNSTSTP HQNWLQTNGF 60 61 QPPLMRPS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.