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View Structure Prediction Details

Protein: ACCD_ARATH
Organism: Arabidopsis thaliana
Length: 488 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCD_ARATH.

Description E-value Query
Range
Subject
Range
gi|51235322, gi|... - gi|52220819|ref|YP_086975.1| acetyl-CoA carboxylase beta subunit [Panax ginseng], gi|51235322|gb|AAT...
645.0 [0..1] [488..18]

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Predicted Domain #1
Region A:
Residues: [1-199]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKSWFNFMF SKGELEYRGE LSKAMDSFAP GEKTTISQDR FIYDMDKNFY GWDERSSYSS  60
   61 SYSNNVDLLV SSKDIRNFIS DDTFFVRDSN KNSYSIFFDK KKKIFEIDND FSDLEKFFYS 120
  121 YCSSSYLNNR SKGDNDLHYD PYIKDTKYNC TNHINSCIDS YFRSYICIDN NFLIDSNNFN 180
  181 ESYIYNFICS ESGKIRESK

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [200-488]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 NYKIRTNRNR SNLISSKDFD ITQNYNQLWI QCDNCYGLMY KKVKMNVCEQ CGHYLKMSSS  60
   61 ERIELSIDPG TWNPMDEDMV SADPIKFHSK EEPYKNRIDS AQKTTGLTDA VQTGTGQLNG 120
  121 IPVALGVMDF RFMGGSMGSV VGEKITRLIE YATNQCLPLI LVCSSGGARM QEGSLSLMQM 180
  181 AKISSVLCDY QSSKKLFYIS ILTSPTTGGV TASFGMLGDI IIAEPYAYIA FAGKRVIEQT 240
  241 LKKAVPEGSQ AAESLLRKGL LDAIVPRNLL KGVLSELFQL HAFFPLNTN

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 81.30103
Match: 2f9yB
Description: No description for 2f9yB was found.

Predicted functions:

Term Confidence Notes
acetyl-CoA carboxylase activity 10.6452464693016 bayes_pls_golite062009
CoA carboxylase activity 10.4560118435089 bayes_pls_golite062009
ligase activity, forming carbon-carbon bonds 10.291155621143 bayes_pls_golite062009
ligase activity 5.44906329604668 bayes_pls_golite062009
biotin carboxylase activity 4.73758144982083 bayes_pls_golite062009
enoyl-CoA hydratase activity 2.20341273353803 bayes_pls_golite062009
catalytic activity 1.46154163027498 bayes_pls_golite062009
3-hydroxyacyl-CoA dehydrogenase activity 0.71437881404683 bayes_pls_golite062009
dodecenoyl-CoA delta-isomerase activity 0.712418056146834 bayes_pls_golite062009
intramolecular oxidoreductase activity, transposing C=C bonds 0.0918189681606029 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle