YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Structure Prediction Details

Protein: ACCO4_ARATH
Organism: Arabidopsis thaliana
Length: 323 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



[What does the above image mean?]


[Show Ginzu Version Information]


Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ACCO4_ARATH.

Description E-value Query
Range
Subject
Range
gi|541861, gi|16254 - pir||JT0755 ethylene-forming enzyme - Arabidopsis thaliana, gi|16254|emb|CAA47251.1| ethylene-formin...
370.0 [0..1] [323..1]

Back

Predicted Domain #1
Region A:
Residues: [1-323]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESFPIINLE KLNGEERAIT MEKIKDACEN WGFFECVNHG ISLELLDKVE KMTKEHYKKC  60
   61 MEERFKESIK NRGLDSLRSE VNDVDWESTF YLKHLPVSNI SDVPDLDDDY RTLMKDFAGK 120
  121 IEKLSEELLD LLCENLGLEK GYLKKVFYGS KRPTFGTKVS NYPPCPNPDL VKGLRAHTDA 180
  181 GGIILLFQDD KVSGLQLLKD GEWVDVPPVK HSIVVNLGDQ LEVITNGKYK SVEHRVLSQT 240
  241 DGEGRMSIAS FYNPGSDSVI FPAPELIGKE AEKEKKENYP RFVFEDYMKL YSAVKFQAKE 300
  301 PRFEAMKAME TTVANNVGPL ATA

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 97.69897
Match: 1w9yA
Description: The structure of ACC oxidase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
1-aminocyclopropane-1-carboxylate oxidase activity 2.55319769490634 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen 1.82471557626796 bayes_pls_golite062009
oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors 1.45256699472411 bayes_pls_golite062009
catalytic activity 0.921320409505 bayes_pls_golite062009
binding 0.881222146308311 bayes_pls_golite062009
oxidoreductase activity 0.748070809709687 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle