Protein: | YWLC_BACSU |
Organism: | Bacillus subtilis |
Length: | 346 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for YWLC_BACSU.
Description | E-value | Query Range |
Subject Range |
|
396.0 | [0..1] | [346..1] |
Region A: Residues: [1-214] |
1 11 21 31 41 51 | | | | | | 1 MKTKRWFVDV TDELSTNDPQ IAQAAALLRE NEVVAFPTET VYGLGANAKN TDAVKKIYEA 60 61 KGRPSDNPLI VHIADISQLE DLTGPAPEKA KTLMKRFWPG ALTLILPCKP DALSPRVTAG 120 121 LETVAIRMPD HPLALALIRE SGLPIAAPSA NLSGKPSPTK AEHVAHDLDG RIAGIVDGGP 180 181 TGIGVESTVL SCADDIPVLL RPGGITKEQI EAVI |
Detection Method: | |
Confidence: | 60.30103 |
Match: | 1k7jA |
Description: | Hypothetical protein YciO |
Matching Structure (courtesy of the PDB): |
Term | Confidence | Notes |
telomeric DNA binding | 2.58217232196133 | bayes_pls_golite062009 |
single-stranded telomeric DNA binding | 1.94245361512193 | bayes_pls_golite062009 |
binding | 1.44524229223398 | bayes_pls_golite062009 |
nucleic acid binding | 1.15094304608167 | bayes_pls_golite062009 |
DNA binding | 0.99027678526068 | bayes_pls_golite062009 |
RNA binding | 0.63108051002538 | bayes_pls_golite062009 |
catalytic activity | 0.343636936190038 | bayes_pls_golite062009 |
protein binding | 0.207821310455625 | bayes_pls_golite062009 |
structure-specific DNA binding | 0.0989469098854212 | bayes_pls_golite062009 |
Region A: Residues: [215-346] |
1 11 21 31 41 51 | | | | | | 1 GPIHVDKGLS DQNEKPISPG MKYTHYAPTA PLAICEGSPE RIQHLIQEYQ QGGRRVGVLT 60 61 TEEKAGVYSA DYVKSCGRRA QLETVAAGLY DALRSFDENK VDFIIAESFP DTGVGLAIMN 120 121 RLMKAAGGRV IR |
Detection Method: | |
Confidence: | 20.69897 |
Match: | 2yv4A |
Description: | No description for 2yv4A was found. |