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View Structure Prediction Details

Protein: PTH_BACSU
Organism: Bacillus subtilis
Length: 188 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for PTH_BACSU.

Description E-value Query
Range
Subject
Range
gi|89084789, gi|... - gi|89100523|ref|ZP_01173384.1| peptidyl-tRNA hydrolase [Bacillus sp. NRRL B-14911], gi|89084789|gb|E...
285.0 [0..1] [185..1]

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Predicted Domain #1
Region A:
Residues: [1-188]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLVIAGLGNP GKNYENTRHN VGFMVIDQLA KEWNIELNQN KFNGLYGTGF VSGKKVLLVK  60
   61 PLTYMNLSGE CLRPLMDYYD VDNEDLTVIY DDLDLPTGKI RLRTKGSAGG HNGIKSLIQH 120
  121 LGTSEFDRIR IGIGRPVNGM KVVDYVLGSF TKEEAPEIEE AVDKSVKACE ASLSKPFLEV 180
  181 MNEFNAKV

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 63.0
Match: 1rynA
Description: Structure of the Chloroplast Group II Intron Splicing Factor CRS2
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
aminoacyl-tRNA hydrolase activity 2.30458185525664 bayes_pls_golite062009
catalytic activity 1.41033217274476 bayes_pls_golite062009
binding 1.31642757964381 bayes_pls_golite062009
hydrolase activity, acting on ester bonds 0.904773408466145 bayes_pls_golite062009
protein binding 0.606551407946731 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle