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View Structure Prediction Details

Protein: CE35975
Organism: Caenorhabditis elegans
Length: 78 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35975.

Description E-value Query
Range
Subject
Range
gi|37590333, gi|... - gi|41152425|ref|NP_955958.1| ubiquitin-conjugating enzyme E2D 1 (UBC4/5 homolog, yeast) [Danio rerio...
117.0 [0..1] [74..1]

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Predicted Domain #1
Region A:
Residues: [1-78]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALKRIQKEL HDLGRDPPAQ CSTGSVGDDL YHWQATIMGP PESPYQGGIF FLTITSRQTI  60
   61 HSNHQRLISP LEFAIRTS

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 26.522879
Match: 1z2uA
Description: The 1.1A crystallographic structure of ubiquitin-conjugating enzyme (ubc-2) from Caenorhabditis elegans: functional and evolutionary significance
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
small conjugating protein ligase activity 0.45543793305446 bayes_pls_golite062009
ubiquitin-protein ligase activity 0.181948894099648 bayes_pls_golite062009
protein binding 0.030781579956521 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle