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View Structure Prediction Details

Protein: CE35787
Organism: Caenorhabditis elegans
Length: 213 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE35787.

Description E-value Query
Range
Subject
Range
CE14349 - status:Partially_confirmed UniProt:O16699 protein_id:AAB66161.1
204.0 [0..28] [196..107]

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Predicted Domain #1
Region A:
Residues: [1-213]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQCSTLLPLL LLIFSNWKGE ASSSPRTLKL CLYLKAIRRS TAECDQVTLD NLTSVEENQP  60
   61 NSTMSPLAKI IANIEKRNEK VKMTKKFKKF GVPLPMCSSN LESGYKQCRM DITCSSGYSC 120
  121 ENNSKTRCCM EANHSPEIER KTEEFKTCPS QLQMAYFCQK TSTARKTVKP CKTDQDCMFS 180
  181 NVQKCCDAGC GFNVCVVASG NYTQNTLIFL GSK

[Run NCBI BLAST on this sequence.]

Detection Method: FFAS03
Confidence: 1.1
Match: 1igrA
Description: Type 1 insulin-like growth factor receptor extracellular domain; Type 1 insulin-like growth factor receptor Cys-rich domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.305994673397171 bayes_pls_golite062009
protein binding 0.0135449554557669 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle