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View Structure Prediction Details

Protein: alh-12
Organism: Caenorhabditis elegans
Length: 430 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for alh-12.

Description E-value Query
Range
Subject
Range
gi|88179418, gi|... - gi|88179418|gb|EAQ86886.1| hypothetical protein CHGG_08139 [Chaetomium globosum CBS 148.51], gi|1161...
519.0 [0..2] [429..10]

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Predicted Domain #1
Region A:
Residues: [1-430]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVFTVPSDLS GGLYFLNGKR TTIESTETFD VIEPRIGQVV AKCPKATADI VDQYVKAAAD  60
   61 AQSAWGETTA LDRGKVLHKV ADLIREHAEE IAIWEVKTNG KPIYEARCDI ASSADTFDFF 120
  121 GGIATAVLQG DSLELPGGPS QRIAYTRREP YGVVGCIGAW NYPFQTCVWK VAPALAAGNA 180
  181 VVYKPSPFAP ASPVLLGEIL TAAGVPKGVY NVIQGEQEAG VALCEHNLVA KVSFTGSVAS 240
  241 GEAVQRQAAT KNVKPVTLEL GGKSEIIIFD DSDVKSAVAS AMLANFLNQG QVCTNATRVF 300
  301 VQKGILASFT EAIVQEANDK LKVGDPLLED TRVGANINEG HLQRILGYVE SAKQEGGVVL 360
  361 RGGVRVHPTG VEGGAYFEPA IITGLSDEAR AVREEIFGAV MLILPFETEE EVIARANNTT 420
  421 YGLAAGVFSG 

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 128.0
Match: 1a4sA
Description: Aldehyde reductase (dehydrogenase), ALDH
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
oxidoreductase activity, acting on the aldehyde or oxo group of donors 5.09598561374689 bayes_pls_golite062009
oxidoreductase activity 4.47226217021998 bayes_pls_golite062009
methylmalonate-semialdehyde dehydrogenase (acylating) activity 3.87605237828483 bayes_pls_golite062009
succinate-semialdehyde dehydrogenase [NAD(P)+] activity 3.64672165191647 bayes_pls_golite062009
1-pyrroline-5-carboxylate dehydrogenase activity 3.49281413016612 bayes_pls_golite062009
3-chloroallyl aldehyde dehydrogenase activity 3.37049090049734 bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor 3.2867555127991 bayes_pls_golite062009
aldehyde dehydrogenase (NAD) activity 2.81851373615334 bayes_pls_golite062009
catalytic activity 2.80804701752928 bayes_pls_golite062009
succinate-semialdehyde dehydrogenase activity 2.71501590413507 bayes_pls_golite062009
aldehyde dehydrogenase [NAD(P)+] activity 2.43250909158896 bayes_pls_golite062009
aminobutyraldehyde dehydrogenase activity 2.35958138496479 bayes_pls_golite062009
malonate-semialdehyde dehydrogenase (acetylating) activity 1.75951883819887 bayes_pls_golite062009
retinal dehydrogenase activity 1.42867174920845 bayes_pls_golite062009
glutamate-5-semialdehyde dehydrogenase activity 0.882678635212924 bayes_pls_golite062009
binding 0.868255071997355 bayes_pls_golite062009
benzaldehyde dehydrogenase activity 0.38785102096584 bayes_pls_golite062009
benzaldehyde dehydrogenase (NAD+) activity 0.23487570676521 bayes_pls_golite062009
histidinol dehydrogenase activity 0.177840865580085 bayes_pls_golite062009

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