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View Structure Prediction Details

Protein: CE33524
Organism: Caenorhabditis elegans
Length: 307 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE33524.

Description E-value Query
Range
Subject
Range
ENSPTRT00000030708 - null
ARFIP1 - ADP-ribosylation factor interacting protein 1
232.0 [0..3] [306..64]

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Predicted Domain #1
Region A:
Residues: [1-85]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGSTASPPE PSAPPADSPF APVTQNDSSP TSDSTETMSR IPTGIKVPDV VANIDTAQVA  60
   61 AKVESFKKWT IGTFKNSKQQ LLEHM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 7.69897
Match: 2gzvA
Description: No description for 2gzvA was found.

Predicted Domain #2
Region A:
Residues: [86-307]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 GKIDKTVDPE FEAQCEVLKD IHRRYGLVVA AAKNFSHVLT QMAEAEKKLS ESFYQLSMKE  60
   61 EQIKAQCTMT SETMRGVGEQ AASLDACLRY FISSMETVYN QTITDTLHTI YNTESARIEY 120
  121 DVDRNDISAA TNPPQGQLTK NLPVGATEKC EEKKAKYEKL KNDAKIKMRL LEENRISVVA 180
  181 AQLEKLQSAL AAYYSGNAKL LEASVRELSF LQSPQPSFIP TM

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 33.69897
Match: 1i49A
Description: Arfaptin, Rac-binding fragment
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
binding 0.171962044848065 bayes_pls_golite062009
protein binding 0.04256104607293 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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