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View Structure Prediction Details

Protein: mut-2
Organism: Caenorhabditis elegans
Length: 338 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for mut-2.

Description E-value Query
Range
Subject
Range
mut-2 - status:Partially_confirmed UniProt:O44768 protein_id:AAB96748.1
250.0 [0..1] [338..1]

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Predicted Domain #1
Region A:
Residues: [1-338]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQPNKDQRS PEDIDFKVKA NPKAFHKFNG KFQRVLRDHE DDFNILSISM QDHFDTTKQP  60
   61 KEEFGKKMDW CYQLKNIISK NNPTWLFNIV PTGSTVTGLA TKNSDLDVAI HIPQAARVLE 120
  121 QEERGRNITD DERQASWREI QLEILQIVRL NLQNDEQINS RINWEHGIQL VQAQIQILKV 180
  181 MTVDGIDCDI SVVMDRFLSS MHNSFLIRHL AHIDGRFAPL CAIVKQWAAS TKVKDPKDGG 240
  241 FNSYALVLLV IHFLQCGTFP PILPNLQEIF KKDNFIAWDD KVYPSILNFG APLPKPLPRI 300
  301 APNNAPLARL FIEFLYYYSM FNFKENYIGA RPVMVMDR

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 38.522879
Match: 1f5aA
Description: Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.222270543382941 bayes_pls_golite062009
transferase activity 0.00393984128503999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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