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View Structure Prediction Details

Protein: CE32576
Organism: Caenorhabditis elegans
Length: 201 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE32576.

Description E-value Query
Range
Subject
Range
gi|33304009 - gi|33304009|gb|AAQ02512.1| protein kinase, cGMP-dependent, type I [synthetic construct]
239.0 [0..1] [201..484]

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Predicted Domain #1
Region A:
Residues: [1-201]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEALEYLHRK NIVYRDLKPE NMLLDRNGWP KLVDFGFAKK LKNGGRTWTF CGTAEYVAPE  60
   61 IVLNKGHDLS VDIWALGIFM CELLTGSPPF SSTDPMVTYN AILKGLEKWA WPRFVTKEAI 120
  121 DMMLSLCKYE PTERLGFGDI GEIRHHIWFD NFDFVGFRAH RIRPPFIPSV ANDIDTSNFD 180
  181 TFPAFDNFAS GSDESGWDID F

[Run NCBI BLAST on this sequence.]

Detection Method: PSI-BLAST
Confidence: 54.69897
Match: 1gzkA
Description: Pkb kinase
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.686492203566958 bayes_pls_golite062009
transferase activity 0.66841261245817 bayes_pls_golite062009
transferase activity, transferring phosphorus-containing groups 0.66326000691279 bayes_pls_golite062009
kinase activity 0.65753777854807 bayes_pls_golite062009
phosphotransferase activity, alcohol group as acceptor 0.64444215862273 bayes_pls_golite062009
protein kinase activity 0.56587465829201 bayes_pls_golite062009
binding 0.0554152720226 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
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